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IMGVR_UViG_2799112907_000002-2799112907-2800868797

Arc-Vir

IMGVR_UViG_2799112907_000002-2799112907-2800868797

Identity

Kingdom:
archaea

Quality

92.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-108
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04266.21 best ASCH 37.1 6.40e-09 98.0% 94.2%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.86 80.0 6.72e-01 100.0% 77.4%
1t62B00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.85 79.0 6.61e-01 100.0% 74.2%
2dp9A01 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.79 66.0 6.62e-01 100.0% 89.0%
1sgvA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.78 40.0 4.90e-01 100.0% 77.8%
1s04A00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.76 70.0 6.73e-01 100.0% 94.5%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.75 47.0 5.36e-01 100.0% 84.0%
3vseA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.71 43.0 5.12e-01 100.0% 88.4%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.71 42.0 5.10e-01 100.0% 89.4%
1te7A00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.70 63.0 6.25e-01 100.0% 95.1%
3zv0C01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.68 46.0 4.00e-01 100.0% 45.4%
1q7hA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.68 46.0 4.95e-01 100.0% 80.2%
3c0kA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.68 42.0 4.90e-01 100.0% 87.3%
2p38A02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.67 42.0 4.93e-01 100.0% 93.8%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.67 42.0 4.83e-01 100.0% 88.6%
1sqwA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.67 46.0 4.93e-01 100.0% 84.3%
1iq8A04 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.65 44.0 4.90e-01 100.0% 88.5%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.65 59.0 5.24e-01 100.0% 88.7%
1jhdA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.63 57.0 4.60e-01 100.0% 66.8%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 26.0 2.90e-01 76.8% 47.5%
8gpsA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.62 31.0 3.06e-01 94.9% 44.9%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 31.0 3.48e-01 94.9% 67.5%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.57 46.0 4.73e-01 100.0% 89.5%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 38.0 4.36e-01 83.8% 97.2%
3h7lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.69e-01 99.0% 73.1%
3cr8A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.53 49.0 4.30e-01 100.0% 70.9%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.52 39.0 3.55e-01 80.8% 88.4%
3fx3B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 3.46e-01 89.9% 69.5%
4dz6A00 3.30.70.141 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain 0.51 40.0 3.40e-01 87.9% 50.0%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 44.0 4.00e-01 100.0% 83.8%
5fcdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 3.17e-01 88.9% 43.4%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 44.0 4.19e-01 98.0% 89.9%
2xadA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.50 40.0 3.03e-01 88.9% 57.9%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077279 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.94 89.0 8.21e-01 100.0% 81.7%
5070577 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.93 89.0 8.52e-01 100.0% 93.6%
4954540 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.91 87.0 8.33e-01 100.0% 90.9%
4953076 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.90 85.0 7.90e-01 100.0% 89.2%
4990496 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.90 84.0 7.95e-01 100.0% 85.2%
4972120 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.89 84.0 8.11e-01 100.0% 90.0%
4155252 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.89 83.0 8.17e-01 100.0% 93.3%
4982523 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.89 83.0 7.88e-01 100.0% 86.1%
5042221 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.88 83.0 8.15e-01 100.0% 94.3%
3165125 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.88 83.0 8.15e-01 100.0% 93.3%
4019865 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.88 83.0 7.15e-01 100.0% 80.0%
4972117 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.88 82.0 7.66e-01 100.0% 85.0%
4998591 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.88 82.0 7.10e-01 100.0% 82.8%
5006048 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.87 78.0 7.50e-01 100.0% 85.5%
3279326 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.87 74.0 7.79e-01 99.0% 98.9%
5022429 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.86 80.0 7.37e-01 100.0% 80.0%
144031 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.86 80.0 6.72e-01 100.0% 77.4%
4995779 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.85 80.0 6.85e-01 100.0% 96.6%
5023996 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.85 80.0 7.59e-01 100.0% 92.9%
4958692 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.85 79.0 6.75e-01 100.0% 82.0%
5035541 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.84 72.0 7.35e-01 100.0% 94.7%
3944719 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 78.0 6.86e-01 100.0% 77.0%
4054728 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.83 45.0 5.64e-01 100.0% 88.3%
177 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.82 76.0 6.50e-01 100.0% 77.8%
4608277 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.82 76.0 6.86e-01 100.0% 96.9%
4384734 1.1.9.10 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C 0.81 44.0 5.36e-01 100.0% 81.5%
4103393 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.81 43.0 5.36e-01 100.0% 85.0%
5078127 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 64.0 6.84e-01 83.8% 96.5%
4165251 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.80 46.0 5.51e-01 100.0% 86.2%
4940231 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.80 70.0 6.32e-01 100.0% 70.7%
4105843 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 42.0 5.39e-01 100.0% 92.7%
4564336 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.79 43.0 5.38e-01 100.0% 88.3%
3603398 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 73.0 7.07e-01 100.0% 99.1%
4122172 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 70.0 6.44e-01 100.0% 76.6%
4558844 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 45.0 5.47e-01 100.0% 87.7%
4970789 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.78 72.0 6.34e-01 100.0% 72.9%
4605985 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 42.0 5.12e-01 100.0% 82.5%
4204421 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.78 42.0 5.22e-01 100.0% 86.7%
4229723 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.77 69.0 5.93e-01 100.0% 63.3%
4620744 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.77 41.0 5.07e-01 100.0% 85.0%
4940646 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 63.0 6.62e-01 99.0% 96.7%
5073325 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.76 69.0 6.14e-01 100.0% 74.3%
4370928 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.76 43.0 5.17e-01 100.0% 85.9%
4582116 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.76 44.0 5.28e-01 100.0% 87.7%
4480273 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 44.0 5.35e-01 100.0% 89.2%
4967879 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 61.0 6.28e-01 100.0% 93.7%
4101732 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 45.0 5.28e-01 100.0% 88.6%
4139909 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.72 41.0 4.91e-01 100.0% 85.9%
4995416 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.71 45.0 5.07e-01 100.0% 84.0%
4564300 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 50.0 5.49e-01 100.0% 88.7%
4498250 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 53.0 5.13e-01 100.0% 70.0%
186 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.71 42.0 5.03e-01 100.0% 86.8%
5053836 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.71 49.0 5.13e-01 100.0% 77.8%
4362623 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 40.0 4.79e-01 100.0% 85.9%
4927245 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.70 48.0 4.91e-01 100.0% 72.6%
4971606 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.70 48.0 4.99e-01 100.0% 76.7%
2834726 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.70 47.0 4.26e-01 100.0% 51.5%
5037242 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.70 47.0 4.51e-01 100.0% 60.0%
5048350 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.70 48.0 5.15e-01 100.0% 83.3%
4375569 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.69 47.0 5.19e-01 100.0% 87.5%
4996509 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.68 46.0 5.19e-01 99.0% 90.7%
5054829 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 46.0 5.23e-01 100.0% 92.0%
4949393 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 46.0 4.88e-01 100.0% 76.7%
4585687 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.68 43.0 4.84e-01 100.0% 84.0%
4948219 1.1.9.54 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PAPS_reduct 0.67 46.0 5.16e-01 100.0% 92.0%
5051591 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.67 45.0 5.00e-01 100.0% 86.3%
4975602 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.67 46.0 5.08e-01 100.0% 87.5%
4453731 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.67 51.0 5.11e-01 100.0% 79.0%
4959440 1.1.9.16 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 62.0 5.09e-01 100.0% 76.5%
3666657 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.67 42.0 4.37e-01 100.0% 67.4%
4589682 1.1.9.16 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 61.0 5.17e-01 100.0% 80.6%
4956000 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.66 41.0 4.77e-01 100.0% 88.6%
5071049 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.66 45.0 5.06e-01 100.0% 92.0%
3208149 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.66 53.0 4.86e-01 100.0% 66.2%
4167855 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.66 45.0 5.05e-01 100.0% 92.0%
5022982 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.65 45.0 5.06e-01 99.0% 93.3%
3945543 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 45.0 4.89e-01 100.0% 87.1%
4647050 1.1.13.56 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.62 43.0 4.68e-01 100.0% 88.7%
4549466 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.61 37.0 4.34e-01 100.0% 87.1%
4946578 1.1.7.140 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.57 47.0 4.39e-01 100.0% 71.7%
4033372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.53 41.0 4.02e-01 100.0% 74.5%
3599865 304.34.1.0 a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases 0.53 41.0 3.21e-01 86.9% 39.0%
5050023 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.94e-01 100.0% 73.1%
3717930 304.34.1.1 a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK 0.52 40.0 3.14e-01 86.9% 37.7%
4029759 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.50 43.0 3.27e-01 99.0% 89.4%