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IMGVR_UViG_2799112914_000003-2799112914-2800883673

Arc-Vir

IMGVR_UViG_2799112914_000003-2799112914-2800883673

Identity

Kingdom:
archaea

Quality

71.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-57
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 3.25e-01 76.5% 35.7%
3rnrB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.58 42.0 2.86e-01 80.4% 88.2%
2p9bA04 1.20.58.520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Amidohydrolase 0.54 40.0 3.38e-01 82.4% 60.9%
5xnyA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.54 36.0 2.34e-01 70.6% 16.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032886 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.85 71.0 4.38e-01 90.2% 95.8%
3943006 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.84 70.0 4.24e-01 90.2% 93.1%
3961833 4033.1.1.1 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.59 46.0 3.51e-01 86.3% 68.8%