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IMGVR_UViG_2799112924_000001-2799112924-2800903562

Arc-Vir

IMGVR_UViG_2799112924_000001-2799112924-2800903562

Identity

Kingdom:
archaea

Quality

93.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-146
PDB
Domain cluster: rep: IMGVR_UViG_2654588138_000002-2654588138-2657039757__D119-248
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 21.0 3.26e-01 92.1% 80.0%
4ls9B02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.55 37.0 3.92e-01 92.1% 76.4%
4o32C00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 29.0 3.47e-01 90.0% 75.8%
1wjkA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 26.0 3.37e-01 88.6% 78.2%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 31.0 3.49e-01 95.7% 71.2%
3tcoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 30.0 3.46e-01 95.7% 73.6%
6lyxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 31.0 3.42e-01 95.7% 68.4%
4f9zA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 32.0 3.52e-01 95.0% 72.4%
4cw9B00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 30.0 3.43e-01 95.0% 73.1%
2f51A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 30.0 3.36e-01 95.0% 70.3%
3ed3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 31.0 3.31e-01 95.7% 67.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3208149 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 57.0 5.87e-01 89.3% 95.4%
3199787 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.67 56.0 5.69e-01 87.1% 94.1%
4957730 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.66 58.0 5.88e-01 96.4% 99.3%
5073325 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.66 54.0 5.49e-01 89.3% 100.0%
4970789 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.65 55.0 5.57e-01 91.4% 100.0%
4932847 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 54.0 5.74e-01 92.9% 100.0%
5016524 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 57.0 5.67e-01 94.3% 97.2%
4995643 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.64 55.0 5.49e-01 92.9% 100.0%
3964426 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 52.0 5.56e-01 88.6% 98.3%
4972117 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 46.0 4.92e-01 73.6% 95.0%
5079450 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.64 55.0 5.56e-01 92.9% 99.3%
4122172 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 52.0 5.45e-01 85.7% 100.0%
3635966 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 49.0 5.39e-01 91.4% 100.0%
4928024 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 52.0 5.47e-01 91.4% 97.7%
4229723 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.62 54.0 5.30e-01 93.6% 95.3%
4961857 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.61 52.0 5.16e-01 92.1% 91.0%
3306380 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.56 31.0 3.48e-01 95.7% 69.5%
None — 0.55 31.0 3.50e-01 95.7% 71.4%
11274 2485.1.1.20 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glrx-like 0.54 27.0 3.11e-01 89.3% 63.0%
4525686 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.54 31.0 3.42e-01 95.7% 70.0%
None — 0.54 31.0 3.42e-01 95.7% 70.6%
4953076 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 43.0 4.56e-01 90.0% 100.0%
5067380 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 40.0 4.09e-01 79.3% 93.6%
4943450 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 32.0 3.85e-01 71.4% 97.6%
4956569 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.52 34.0 3.78e-01 90.0% 81.7%
5000619 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.51 35.0 3.73e-01 90.7% 80.7%
3405205 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 29.0 3.26e-01 95.7% 71.4%
4026796 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.51 30.0 3.34e-01 96.4% 71.3%
4055915 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.50 33.0 3.54e-01 90.7% 77.5%
D2 high residues 157-272
PDB
Domain cluster: rep: MZ969646.1__UAW07892.1__X__00073__D38-154
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01541.31 best GIY-YIG 30.8 4.00e-07 74.1% 89.7%