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IMGVR_UViG_2802429591_000002-2802429591-2805863770

Arc-Vir

IMGVR_UViG_2802429591_000002-2802429591-2805863770

Identity

Kingdom:
archaea

Quality

67.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-51
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 66.0 4.81e-01 100.0% 66.1%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.72 54.0 3.44e-01 81.2% 46.7%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 61.0 4.54e-01 100.0% 58.1%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.69 54.0 4.37e-01 85.4% 79.1%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 58.0 4.46e-01 100.0% 63.9%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.69 57.0 5.03e-01 97.9% 88.2%
8aasC01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 47.0 3.74e-01 77.1% 59.8%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 3.79e-01 85.4% 62.2%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.64 55.0 4.51e-01 100.0% 67.4%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.63 51.0 3.84e-01 100.0% 60.3%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 52.0 4.61e-01 97.9% 86.8%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.63 48.0 4.64e-01 87.5% 72.7%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 3.90e-01 79.2% 67.5%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.62 47.0 2.98e-01 83.3% 30.2%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.71e-01 100.0% 75.0%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.62 52.0 3.80e-01 100.0% 34.1%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 44.0 2.86e-01 81.2% 47.1%
3oc4B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 48.0 3.30e-01 89.6% 48.4%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 4.72e-01 97.9% 93.5%
3bfmA02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.63e-01 81.2% 93.0%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 41.0 3.86e-01 85.4% 54.8%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 50.0 4.65e-01 97.9% 93.7%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 49.0 4.38e-01 100.0% 84.2%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.60 49.0 3.89e-01 95.8% 66.7%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.59 48.0 3.89e-01 100.0% 45.5%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.59 46.0 3.64e-01 89.6% 88.1%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.16e-01 100.0% 82.9%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.13e-01 97.9% 70.0%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.33e-01 93.8% 94.7%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 49.0 4.48e-01 100.0% 72.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.31e-01 95.8% 79.4%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.12e-01 87.5% 58.6%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 39.0 3.06e-01 72.9% 35.9%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 3.98e-01 100.0% 76.2%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 43.0 2.83e-01 100.0% 93.7%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.21e-01 95.8% 83.1%
1kaxA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.56 41.0 4.03e-01 91.7% 70.9%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.37e-01 95.8% 96.4%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.48e-01 93.8% 97.9%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 44.0 3.72e-01 100.0% 76.5%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.94e-01 89.6% 77.0%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 43.0 2.79e-01 100.0% 89.3%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.36e-01 97.9% 93.9%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 43.0 2.74e-01 100.0% 80.8%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 3.96e-01 100.0% 84.7%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 45.0 4.27e-01 100.0% 88.3%
2fb5A02 3.40.1700.10 Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain 0.53 38.0 2.89e-01 79.2% 85.6%
3rlfF03 2.40.430.10 Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP 0.53 41.0 3.62e-01 100.0% 59.1%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 42.0 3.42e-01 100.0% 69.4%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 39.0 2.50e-01 100.0% 94.7%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 44.0 3.00e-01 100.0% 28.1%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.50 39.0 3.44e-01 100.0% 84.4%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3247178 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.79 65.0 5.47e-01 100.0% 55.0%
3475247 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.77 58.0 5.11e-01 100.0% 55.7%
3405941 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.76 57.0 5.11e-01 100.0% 57.4%
3828657 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 63.0 5.05e-01 100.0% 87.0%
3226400 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.73 61.0 4.99e-01 100.0% 50.0%
4026536 220.1.1.53 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.73 66.0 4.79e-01 100.0% 66.1%
3226399 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.73 59.0 5.08e-01 100.0% 56.2%
3976843 9.11.1.1 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.71 63.0 5.16e-01 100.0% 66.3%
3230771 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.71 59.0 4.89e-01 100.0% 51.1%
3693093 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 59.0 4.50e-01 100.0% 73.6%
3789912 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.71 59.0 4.89e-01 100.0% 52.9%
1283866 220.1.1.51 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C 0.70 61.0 4.54e-01 100.0% 58.1%
3998402 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.69 59.0 4.78e-01 100.0% 52.1%
4023915 220.1.1.53 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.68 55.0 4.38e-01 100.0% 75.7%
3643227 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.68 56.0 4.07e-01 100.0% 56.7%
3480535 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 59.0 4.61e-01 100.0% 61.0%
3292855 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.66 55.0 4.23e-01 100.0% 65.6%
3991244 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.64 50.0 5.20e-01 100.0% 93.3%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.64 46.0 3.52e-01 79.2% 92.5%
4927858 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 47.0 4.61e-01 100.0% 74.5%
4478186 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.42e-01 93.8% 100.0%
3928361 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.63 55.0 3.98e-01 100.0% 72.9%
3726931 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.06e-01 97.9% 80.0%
3733806 4.1.1.72 beta barrels › SH3 › SH3 › SH3 › Hva1_TUDOR 0.62 52.0 4.52e-01 95.8% 92.0%
3263489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.53e-01 91.7% 86.2%
3512735 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.62 53.0 3.43e-01 100.0% 53.8%
3925408 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 5.03e-01 100.0% 92.0%
3899829 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 48.0 4.31e-01 100.0% 76.0%
3399284 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 46.0 4.30e-01 93.8% 86.2%
3254502 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 45.0 3.79e-01 91.7% 65.3%
3542245 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 46.0 4.19e-01 93.8% 80.0%
3214149 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 45.0 4.18e-01 89.6% 80.0%
3535437 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 46.0 4.39e-01 93.8% 93.3%
3696092 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 46.0 4.18e-01 93.8% 80.0%
3706087 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.54e-01 97.9% 81.7%
4483819 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 46.0 4.22e-01 95.8% 78.6%
3585447 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 46.0 4.05e-01 95.8% 68.8%
4104114 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 45.0 4.22e-01 93.8% 83.1%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.57 43.0 4.05e-01 100.0% 67.7%
3899851 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 46.0 4.29e-01 95.8% 84.6%
3563539 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.18e-01 95.8% 82.9%
4954562 10.29.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins 0.57 46.0 3.62e-01 100.0% 72.5%
4133335 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 45.0 4.29e-01 93.8% 91.7%
4019925 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 45.0 4.09e-01 93.8% 80.0%
4610859 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 45.0 4.24e-01 97.9% 86.2%
423468 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 3.99e-01 100.0% 75.3%
3575263 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 47.0 4.38e-01 100.0% 98.5%
3737825 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 46.0 4.47e-01 97.9% 100.0%
3900208 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 44.0 4.21e-01 97.9% 87.5%
3523584 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 44.0 3.99e-01 93.8% 80.0%
4680376 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.57 43.0 4.23e-01 97.9% 80.0%
3586488 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 44.0 2.75e-01 97.9% 91.7%
3748846 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 45.0 4.25e-01 100.0% 89.2%
3933965 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 44.0 4.28e-01 95.8% 94.8%
3267416 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 45.0 3.99e-01 100.0% 73.8%
3470395 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 46.0 3.04e-01 97.9% 21.3%
3625909 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 44.0 3.92e-01 95.8% 68.8%
3485287 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 45.0 3.09e-01 100.0% 59.0%
3896701 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 43.0 3.73e-01 95.8% 61.1%
3516244 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 43.0 3.83e-01 95.8% 68.8%
3880439 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.55 44.0 2.60e-01 100.0% 82.8%
3906249 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 44.0 3.98e-01 100.0% 80.0%
4795566 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 42.0 4.00e-01 100.0% 85.1%
3237004 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 43.0 2.65e-01 100.0% 91.5%
3590122 4999.1.1.1 beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX 0.54 43.0 4.04e-01 97.9% 81.5%
3614286 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 41.0 2.61e-01 100.0% 96.8%
2324014 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 41.0 2.88e-01 100.0% 63.8%