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IMGVR_UViG_2802429591_000003-2802429591-2805863865
Arc-VirIMGVR_UViG_2802429591_000003-2802429591-2805863865
Identity
- Kingdom:
- archaea
Quality
69.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-109
Domain cluster:
rep: IMGVR_UViG_3300029822_000964-3300029822-Ga0134854_10030613__D692-751
D2
high
residues 185-196_230-310
D3
high
residues 356-463
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rqtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 31.0 | 3.74e-01 | 94.4% | 82.0% |
| 1sf9A02 | 2.30.30.340 | Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains | 0.59 | 27.0 | 3.41e-01 | 86.1% | 75.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 42.0 | 3.57e-01 | 81.5% | 86.0% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.54 | 34.0 | 3.59e-01 | 77.8% | 68.7% |
| 1vjqA00 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.54 | 24.0 | 2.82e-01 | 77.8% | 54.8% |
| 2hcuA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.51 | 46.0 | 3.92e-01 | 100.0% | 91.0% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 33.0 | 3.74e-01 | 81.5% | 91.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4357574 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.65 | 39.0 | 4.72e-01 | 78.7% | 92.9% |
| 4000746 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.54 | 33.0 | 3.63e-01 | 80.6% | 75.3% |
D4
high
residues 486-621
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00105__D20-173