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IMGVR_UViG_2806310686_000001-2806310686-2807231104
Arc-VirIMGVR_UViG_2806310686_000001-2806310686-2807231104
Identity
- Kingdom:
- archaea
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 176-286_427-468
Domain cluster:
rep: MT325768.1__QJI52461.1__X__00164__D105-240_385-434
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03050.21 best | DDE_Tnp_IS66 | 63.3 | 3.50e-17 | 79.7% | 43.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.56 | 26.0 | 3.39e-01 | 80.4% | 77.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4494466 | 2484.1.1.231 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66, DDE_Tnp_IS66_C | 0.93 | 88.0 | 7.25e-01 | 97.4% | 92.7% |
| 5017718 | 2484.1.1.115 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66 | 0.93 | 87.0 | 7.35e-01 | 96.7% | 94.3% |
| 4583731 | 2484.1.1.231 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66, DDE_Tnp_IS66_C | 0.91 | 85.0 | 6.91e-01 | 96.7% | 91.2% |
| 5030453 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.85 | 77.0 | 6.54e-01 | 95.4% | 96.6% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.84 | 70.0 | 5.57e-01 | 85.6% | 99.3% |
| 5027917 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.84 | 77.0 | 6.45e-01 | 96.1% | 96.7% |
| 3506369 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.82 | 69.0 | 5.35e-01 | 87.6% | 91.1% |
| 4958656 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.81 | 67.0 | 5.26e-01 | 85.6% | 93.2% |
| 5049118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 31.0 | 4.93e-01 | 86.3% | 87.7% |
| 5050956 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 72.0 | 5.53e-01 | 95.4% | 99.1% |
| 3376926 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.73 | 61.0 | 4.14e-01 | 88.2% | 99.3% |
| 3908854 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.67 | 58.0 | 4.09e-01 | 93.5% | 99.8% |
| 3710891 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.56 | 32.0 | 3.80e-01 | 79.7% | 84.0% |
| 3519032 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 36.0 | 4.25e-01 | 87.6% | 100.0% |
| 3420092 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 30.0 | 3.95e-01 | 93.5% | 100.0% |
| 3670595 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 30.0 | 3.66e-01 | 93.5% | 85.3% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 28.0 | 3.64e-01 | 83.7% | 95.0% |
D2
high
residues 290-397
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03050.21 best | DDE_Tnp_IS66 | 32.8 | 6.90e-08 | 96.3% | 31.0% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7p5hB03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.67 | 52.0 | 5.65e-01 | 84.3% | 100.0% |
| 2idgA00 | 1.10.3480.10 | Mainly Alpha › Orthogonal Bundle › TorD-like › TorD-like | 0.67 | 51.0 | 4.51e-01 | 81.5% | 100.0% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 44.0 | 4.92e-01 | 78.7% | 92.7% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 52.0 | 4.70e-01 | 86.1% | 70.8% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 55.0 | 5.40e-01 | 100.0% | 92.5% |
| 1a7eA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.62 | 46.0 | 4.48e-01 | 77.8% | 83.9% |
| 2b1eA02 | 1.20.1310.30 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › | 0.59 | 41.0 | 3.73e-01 | 71.3% | 54.3% |
| 3aqbA00 | 1.20.120.1450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 42.0 | 3.89e-01 | 73.1% | 83.0% |
| 5hb0D01 | 1.20.120.1880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain | 0.59 | 40.0 | 3.04e-01 | 71.3% | 29.9% |
| 6i2mB02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 39.0 | 3.81e-01 | 72.2% | 59.8% |
| 8gy0A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 52.0 | 3.86e-01 | 99.1% | 88.6% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 51.0 | 4.61e-01 | 100.0% | 96.0% |
| 3efzB00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.56 | 42.0 | 3.39e-01 | 80.6% | 74.7% |
| 2vebA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 46.0 | 3.86e-01 | 100.0% | 82.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3187449 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.76 | 63.0 | 5.66e-01 | 88.9% | 93.8% |
| 4009669 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.72 | 61.0 | 5.06e-01 | 100.0% | 53.0% |
| 3807513 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.72 | 62.0 | 5.74e-01 | 93.5% | 92.6% |
| 3597998 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 48.0 | 3.62e-01 | 95.4% | 31.2% |
| 3624615 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.64 | 59.0 | 5.45e-01 | 100.0% | 89.6% |
| 3420043 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.64 | 49.0 | 4.35e-01 | 81.5% | 73.8% |
| 4479929 | 601.1.1.89 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › FUSC | 0.64 | 58.0 | 4.77e-01 | 100.0% | 56.9% |
| 4978581 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.59 | 44.0 | 4.60e-01 | 78.7% | 87.0% |
| 3970726 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.59 | 42.0 | 3.93e-01 | 75.0% | 63.6% |
| 3062952 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 42.0 | 4.32e-01 | 75.9% | 95.2% |
| 3731622 | 109.1.1.26 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3 | 0.53 | 45.0 | 3.52e-01 | 96.3% | 83.7% |