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IMGVR_UViG_2811994932_000001-2811994932-2812540448

Arc-Vir

IMGVR_UViG_2811994932_000001-2811994932-2812540448

Identity

Kingdom:
archaea

Quality

81.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-69
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tquM01 1.10.3720.10 Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like 0.57 47.0 3.24e-01 92.6% 64.1%
4gdxB00 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.52 42.0 3.08e-01 89.7% 69.8%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3877406 386.1.1.308 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn_ribbon_IFT122_C 0.69 51.0 5.41e-01 82.4% 90.0%
4940072 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.63 54.0 3.66e-01 92.6% 59.6%
3290393 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.62 46.0 3.00e-01 79.4% 30.2%
4940073 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.61 52.0 3.59e-01 92.6% 59.1%
4580548 109.4.1.211 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19,TPR_20 0.60 42.0 2.89e-01 72.1% 30.7%
3272076 109.24.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A 0.60 45.0 3.41e-01 77.9% 79.3%
3518686 109.4.1.135 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_N 0.59 51.0 3.22e-01 92.6% 25.8%
4979047 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 3.21e-01 77.9% 97.0%
3692667 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.58 43.0 2.70e-01 80.9% 29.4%
3594275 4961.1.1.1 ↗ a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4 0.56 39.0 3.59e-01 83.8% 54.4%
5044525 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.56 46.0 3.13e-01 100.0% 65.7%
4995713 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 36.0 3.27e-01 83.8% 48.4%
3481969 109.4.1.135 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_N 0.53 46.0 2.99e-01 97.1% 54.5%
3615756 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 32.0 3.70e-01 100.0% 95.6%
4013540 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.51 43.0 4.03e-01 98.5% 74.1%
4166692 1075.1.1.20 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_CDR 0.50 37.0 2.22e-01 80.9% 28.9%
D2 medium residues 72-105
PDB