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IMGVR_UViG_2811995091_000091-2811995091-2813113692
Arc-VirIMGVR_UViG_2811995091_000091-2811995091-2813113692
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-135
Domain cluster:
rep: OM971648.1__UQJ95065.1__IANJMKHF_00159__00159__D2-75
D2
medium
residues 1-66
Domain cluster:
rep: OQ508958.1__WGH49937.1__X__00028__D1-82
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 152lA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 50.0 | 3.67e-01 | 74.2% | 32.9% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 47.0 | 3.73e-01 | 75.8% | 44.4% |
| 4yf2A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.61 | 46.0 | 3.69e-01 | 80.3% | 48.5% |
| 2anvA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 42.0 | 3.31e-01 | 75.8% | 34.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.53e-01 | 72.7% | 87.4% |
| 4a1nA01 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.57 | 43.0 | 2.97e-01 | 81.8% | 64.2% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.57 | 40.0 | 3.52e-01 | 74.2% | 50.5% |
| 1p8jA01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.56 | 41.0 | 2.64e-01 | 77.3% | 88.3% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 2.93e-01 | 72.7% | 50.6% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 39.0 | 2.98e-01 | 75.8% | 33.5% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.54 | 38.0 | 2.52e-01 | 74.2% | 82.4% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 40.0 | 2.64e-01 | 83.3% | 40.1% |
| 2uvaG11 | 6.10.60.10 | Special › Helix non-globular › Hydrophobic Seed Protein › | 0.52 | 28.0 | 2.99e-01 | 77.3% | 58.2% |
| 3uoxB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.74e-01 | 89.4% | 82.4% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.51 | 39.0 | 3.09e-01 | 86.4% | 86.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2439620 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.72 | 51.0 | 3.05e-01 | 74.2% | 12.2% |
| 2665501 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.69 | 53.0 | 3.76e-01 | 80.3% | 33.7% |
| 3949298 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.68 | 47.0 | 3.42e-01 | 74.2% | 27.4% |
| 4019669 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.68 | 47.0 | 3.56e-01 | 75.8% | 31.0% |
| 3944610 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.66 | 46.0 | 3.41e-01 | 74.2% | 30.2% |
| 2771202 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.66 | 46.0 | 3.45e-01 | 75.8% | 30.6% |
| 3695634 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.65 | 35.0 | 2.42e-01 | 71.2% | 16.7% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 45.0 | 3.57e-01 | 72.7% | 65.4% |
| 4015750 | 7558.1.1.0 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase | 0.62 | 43.0 | 2.67e-01 | 71.2% | 70.0% |
| 2524005 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.62 | 44.0 | 3.28e-01 | 75.8% | 37.4% |
| 3399777 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.60 | 42.0 | 2.87e-01 | 72.7% | 20.8% |
| 159686 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.60 | 42.0 | 3.31e-01 | 75.8% | 34.2% |
| 154263 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 41.0 | 3.53e-01 | 72.7% | 87.4% |
| 3724187 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 39.0 | 3.70e-01 | 72.7% | 82.5% |
| 4207016 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.56 | 39.0 | 2.76e-01 | 71.2% | 29.7% |
| 3602038 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 2.72e-01 | 97.0% | 19.1% |
| 5051226 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.55 | 47.0 | 4.07e-01 | 93.9% | 93.0% |
| 3831895 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.55 | 47.0 | 3.15e-01 | 98.5% | 42.2% |
| 3238934 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 47.0 | 3.89e-01 | 97.0% | 85.8% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.55 | 44.0 | 3.44e-01 | 89.4% | 81.4% |
| 4422880 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.54 | 41.0 | 2.94e-01 | 89.4% | 28.2% |
| 5083115 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.52 | 41.0 | 3.00e-01 | 86.4% | 69.7% |
| 3920955 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.51 | 45.0 | 3.09e-01 | 100.0% | 78.2% |
| 2488339 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.51 | 39.0 | 3.09e-01 | 86.4% | 86.5% |
| 3405466 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 34.0 | 2.59e-01 | 71.2% | 93.9% |