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IMGVR_UViG_2853968202_000001-2853968202-2853970057
Arc-VirIMGVR_UViG_2853968202_000001-2853968202-2853970057
Identity
- Kingdom:
- archaea
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-125
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.61 | 29.0 | 3.53e-01 | 71.1% | 69.7% |
| 5uayA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 26.0 | 3.14e-01 | 71.1% | 67.1% |
| 2lpbA00 | 1.10.287.2920 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 24.0 | 2.90e-01 | 74.4% | 63.0% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 35.0 | 3.13e-01 | 71.1% | 76.0% |
| 4g0aA01 | 3.90.1400.10 | Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.51 | 35.0 | 3.38e-01 | 71.9% | 85.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4258338 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.63 | 41.0 | 4.27e-01 | 77.7% | 71.8% |
| 3895743 | 3615.1.1.7 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 | 0.57 | 37.0 | 3.17e-01 | 91.7% | 41.6% |
| 3506312 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 41.0 | 4.01e-01 | 100.0% | 69.6% |
| 3786564 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 3.02e-01 | 73.6% | 64.0% |
| 4177935 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.52 | 32.0 | 3.28e-01 | 86.0% | 61.7% |
| 4939058 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.51 | 39.0 | 3.14e-01 | 81.8% | 59.6% |
| 85688 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.51 | 36.0 | 3.42e-01 | 71.9% | 86.6% |