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IMGVR_UViG_2860317346_000001-2860317346-2860319190
Arc-VirIMGVR_UViG_2860317346_000001-2860317346-2860319190
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-146
Domain cluster:
rep: IMGVR_UViG_3300032820_001765-3300032820-Ga0310342_1000087043__D16-150
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17338.9 best | GP88 | 94.6 | 1.20e-26 | 97.2% | 57.6% |
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m7tA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 55.0 | 4.55e-01 | 97.9% | 45.5% |
| 1tv8B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 52.0 | 3.99e-01 | 94.4% | 35.0% |
| 3ny7A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.68 | 48.0 | 5.25e-01 | 100.0% | 88.1% |
| 2gdqA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 44.0 | 3.58e-01 | 95.1% | 35.7% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 53.0 | 4.41e-01 | 97.9% | 51.8% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 43.0 | 4.58e-01 | 94.4% | 81.1% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 51.0 | 4.15e-01 | 100.0% | 48.3% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 50.0 | 3.98e-01 | 87.3% | 77.1% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 43.0 | 4.57e-01 | 97.9% | 82.0% |
| 3emzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 47.0 | 3.61e-01 | 83.1% | 81.9% |
| 2jk1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 41.0 | 4.18e-01 | 93.7% | 71.7% |
| 6xigA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 4.00e-01 | 95.1% | 47.5% |
| 3ktoA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 41.0 | 4.38e-01 | 94.4% | 84.4% |
| 2oczA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 44.0 | 3.82e-01 | 100.0% | 51.8% |
| 1h7nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 51.0 | 3.92e-01 | 98.6% | 58.5% |
| 4d6yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 40.0 | 4.32e-01 | 93.7% | 84.3% |
| 2vccA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 51.0 | 3.89e-01 | 97.9% | 72.2% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 50.0 | 4.47e-01 | 95.1% | 78.1% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 49.0 | 4.22e-01 | 94.4% | 81.3% |
| 2ya0A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 48.0 | 3.34e-01 | 94.4% | 53.7% |
| 4m8kA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 49.0 | 4.25e-01 | 95.1% | 83.1% |
| 1e40A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 50.0 | 3.59e-01 | 97.9% | 70.7% |
| 3b0pA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 49.0 | 4.20e-01 | 97.9% | 79.7% |
| 3edeA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 49.0 | 3.54e-01 | 98.6% | 62.8% |
| 2fhfA04 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 49.0 | 3.26e-01 | 97.9% | 52.9% |
| 4ohxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 4.23e-01 | 99.3% | 67.1% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 45.0 | 4.29e-01 | 96.5% | 74.9% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.64e-01 | 96.5% | 46.1% |
| 3o9zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 4.65e-01 | 94.4% | 98.5% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 48.0 | 4.64e-01 | 100.0% | 90.3% |
| 3epnB01 | 3.20.20.540 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain | 0.54 | 47.0 | 3.77e-01 | 99.3% | 55.9% |
| 4hu8A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 48.0 | 3.52e-01 | 97.9% | 72.5% |
| 4e2oA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 47.0 | 3.58e-01 | 99.3% | 49.9% |
| 6yhrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 4.25e-01 | 97.2% | 95.4% |
| 2r3bA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 45.0 | 3.65e-01 | 98.6% | 48.0% |
| 4p98A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.64e-01 | 94.4% | 92.4% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 38.0 | 4.09e-01 | 76.8% | 86.2% |
| 2o55A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.53 | 48.0 | 3.95e-01 | 99.3% | 62.2% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 3.63e-01 | 98.6% | 51.1% |
| 5z1aA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.65e-01 | 97.9% | 50.3% |
| 1yt8A03 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.52 | 32.0 | 3.81e-01 | 97.2% | 94.5% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.38e-01 | 90.8% | 74.9% |
| 3mggB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 45.0 | 4.29e-01 | 96.5% | 86.6% |
| 3mczA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.75e-01 | 97.2% | 69.9% |
| 6d1pB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 45.0 | 3.48e-01 | 97.9% | 48.7% |
| 3s99A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 43.0 | 4.40e-01 | 94.4% | 95.6% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991251 | 2002.1.1.453 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GP88 | 0.83 | 79.0 | 6.07e-01 | 100.0% | 50.9% |
| 5054052 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 53.0 | 3.94e-01 | 93.7% | 30.6% |
| 4971612 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 58.0 | 4.60e-01 | 100.0% | 43.6% |
| 4198344 | 2495.1.1.2 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › MinC_N_1 | 0.70 | 46.0 | 5.04e-01 | 100.0% | 81.7% |
| 4338897 | 2002.1.1.121 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C | 0.70 | 52.0 | 3.96e-01 | 94.4% | 33.8% |
| 4081910 | 2002.1.1.121 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C | 0.65 | 52.0 | 3.90e-01 | 98.6% | 35.0% |
| 4938531 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.64 | 42.0 | 4.08e-01 | 100.0% | 59.1% |
| 4671710 | 2007.1.18.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) › Radical_SAM | 0.64 | 53.0 | 5.47e-01 | 97.9% | 94.1% |
| 2834135 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.64 | 55.0 | 4.63e-01 | 94.4% | 81.1% |
| 4256623 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.63 | 44.0 | 4.30e-01 | 100.0% | 65.4% |
| 4092963 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.61 | 54.0 | 4.80e-01 | 95.8% | 87.5% |
| 3623081 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.60 | 46.0 | 4.76e-01 | 97.2% | 84.4% |
| 5047778 | 2002.1.1.440 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PYC_OADA | 0.59 | 48.0 | 3.42e-01 | 88.0% | 48.4% |
| 3561542 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 46.0 | 4.27e-01 | 96.5% | 67.8% |
| 1253182 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.57 | 46.0 | 4.73e-01 | 97.2% | 90.4% |
| 4976830 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.57 | 50.0 | 4.32e-01 | 94.4% | 78.1% |
| 2062975 | 7574.1.1.6 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C,PFO_beta_C | 0.56 | 34.0 | 4.14e-01 | 96.5% | 94.5% |
| 4424971 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.56 | 48.0 | 3.78e-01 | 95.1% | 95.8% |
| 5054288 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.56 | 47.0 | 3.74e-01 | 93.7% | 95.2% |
| 5050225 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.55 | 49.0 | 4.37e-01 | 99.3% | 72.9% |
| 3495953 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 49.0 | 3.52e-01 | 97.9% | 62.4% |
| 5049857 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.55 | 47.0 | 3.81e-01 | 95.1% | 85.2% |
| 4975603 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.55 | 48.0 | 4.17e-01 | 94.4% | 77.7% |
| 4390537 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.55 | 48.0 | 3.73e-01 | 95.8% | 93.9% |
| 3567135 | 2002.1.1.180 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › hDGE_amylase | 0.55 | 49.0 | 3.42e-01 | 98.6% | 65.8% |
| 3729594 | 1081.1.1.1 ↗ | alpha arrays › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › hDGE_amylase | 0.55 | 48.0 | 3.57e-01 | 98.6% | 64.4% |
| 4579662 | 247.1.1.51 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.55 | 48.0 | 3.75e-01 | 95.8% | 95.4% |
| 4340557 | 2002.1.1.81 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiC_Rad_SAM | 0.55 | 49.0 | 3.25e-01 | 98.6% | 33.7% |
| 4987616 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 49.0 | 4.39e-01 | 100.0% | 77.5% |
| 4068562 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.54 | 47.0 | 3.75e-01 | 95.1% | 97.3% |
| 3289185 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.54 | 47.0 | 3.74e-01 | 96.5% | 96.1% |
| 3598940 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.54 | 49.0 | 3.73e-01 | 98.6% | 46.1% |
| 5016101 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.54 | 48.0 | 3.51e-01 | 97.9% | 49.9% |
| 5060035 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.54 | 46.0 | 4.08e-01 | 93.0% | 100.0% |
| 4486626 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.54 | 47.0 | 3.68e-01 | 95.1% | 95.4% |
| 5038612 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.54 | 48.0 | 3.99e-01 | 98.6% | 91.0% |
| 4350189 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.54 | 48.0 | 3.70e-01 | 97.9% | 93.8% |
| 4995525 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.54 | 47.0 | 3.69e-01 | 97.2% | 92.7% |
| 4561429 | 2002.1.1.82 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiC_Rad_SAM,ThiC-associated | 0.54 | 47.0 | 3.15e-01 | 99.3% | 26.7% |
| 4460652 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.54 | 47.0 | 3.73e-01 | 97.2% | 93.4% |
| 4942120 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.54 | 43.0 | 3.97e-01 | 95.1% | 65.4% |
| 4665965 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 47.0 | 3.19e-01 | 99.3% | 28.7% |
| 5052753 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 3.97e-01 | 89.4% | 71.2% |
| 4123757 | 2002.1.1.82 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiC_Rad_SAM,ThiC-associated | 0.54 | 47.0 | 3.17e-01 | 99.3% | 28.0% |
| 4590206 | 2002.1.1.82 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ThiC_Rad_SAM,ThiC-associated | 0.54 | 47.0 | 3.20e-01 | 99.3% | 29.0% |
| 5012764 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.54 | 47.0 | 3.69e-01 | 97.2% | 94.2% |
| 4218750 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.53 | 47.0 | 3.73e-01 | 97.9% | 98.0% |
| 5040476 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.53 | 47.0 | 3.80e-01 | 96.5% | 94.4% |
| 4643557 | 247.1.1.24 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 | 0.53 | 46.0 | 3.63e-01 | 96.5% | 93.3% |
| 4050883 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.53 | 47.0 | 3.68e-01 | 97.9% | 96.8% |
| 4956614 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.53 | 46.0 | 3.69e-01 | 97.9% | 98.3% |
| 4508616 | 247.1.1.29 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.53 | 47.0 | 3.66e-01 | 97.9% | 97.1% |
| 4053783 | 247.1.1.33 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Anti-Pycsar_Apyc1 | 0.53 | 46.0 | 3.72e-01 | 97.9% | 97.6% |
| 4983275 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.52 | 46.0 | 3.74e-01 | 96.5% | 88.9% |
| 1842690 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.52 | 44.0 | 3.43e-01 | 91.5% | 74.8% |
| 4979289 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.52 | 46.0 | 3.73e-01 | 97.9% | 98.2% |
| 5074580 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.51 | 44.0 | 3.68e-01 | 94.4% | 76.1% |
| 4938580 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.51 | 45.0 | 3.98e-01 | 97.2% | 82.9% |
| 5071147 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.51 | 41.0 | 4.21e-01 | 93.7% | 91.8% |
| 4996354 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.50 | 45.0 | 3.55e-01 | 99.3% | 49.0% |
D2
medium
residues 147-199
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7clgB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.59e-01 | 96.2% | 41.2% |
| 6yhrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 51.0 | 3.52e-01 | 94.3% | 40.2% |
| 3aawC01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 49.0 | 3.36e-01 | 100.0% | 60.8% |
| 4w7sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 48.0 | 3.42e-01 | 96.2% | 45.2% |
| 3ix9A00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.59 | 41.0 | 3.09e-01 | 79.2% | 62.7% |
| 7nadx01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.03e-01 | 96.2% | 52.4% |
| 3d6kA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 44.0 | 3.03e-01 | 100.0% | 33.2% |
| 1fg7A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 43.0 | 3.04e-01 | 98.1% | 39.0% |
| 1jp4A02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.53 | 39.0 | 3.04e-01 | 81.1% | 76.0% |
| 2vl7A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 3.11e-01 | 98.1% | 37.1% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.53 | 41.0 | 3.45e-01 | 100.0% | 57.3% |
| 3g0tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 40.0 | 2.92e-01 | 98.1% | 40.6% |
| 2fnuA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 41.0 | 2.81e-01 | 98.1% | 31.0% |
| 2aeuA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 40.0 | 2.85e-01 | 98.1% | 33.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944436 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 49.0 | 2.92e-01 | 92.5% | 19.8% |
| 4313485 | 2004.1.1.1075 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30518 | 0.60 | 47.0 | 3.67e-01 | 90.6% | 64.8% |
| 185911 | 2004.7.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › VP4 N-terminal domain › VP4 N-terminal domain › Orbi_VP4 | 0.58 | 41.0 | 3.42e-01 | 81.1% | 46.8% |
| 3720527 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 39.0 | 2.89e-01 | 88.7% | 78.8% |