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IMGVR_UViG_2860317346_000001-2860317346-2860319207
Arc-VirIMGVR_UViG_2860317346_000001-2860317346-2860319207
Identity
- Kingdom:
- archaea
Quality
96.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-75
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18843.7 best | LPD28 | 45.5 | 6.80e-12 | 95.9% | 63.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 43.0 | 3.34e-01 | 93.2% | 80.2% |
| 3doaA03 | 3.40.970.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like | 0.50 | 30.0 | 3.38e-01 | 75.3% | 95.3% |
| 1od3A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 35.0 | 3.01e-01 | 75.3% | 93.1% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 41.0 | 3.42e-01 | 93.2% | 95.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.54 | 37.0 | 3.55e-01 | 71.2% | 94.1% |
| 3930134 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 40.0 | 3.71e-01 | 83.6% | 63.2% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.53 | 37.0 | 3.67e-01 | 72.6% | 97.3% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.52 | 36.0 | 3.51e-01 | 75.3% | 89.4% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.51 | 37.0 | 2.39e-01 | 79.5% | 51.4% |