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IMGVR_UViG_2860317346_000001-2860317346-2860319207

Arc-Vir

IMGVR_UViG_2860317346_000001-2860317346-2860319207

Identity

Kingdom:
archaea

Quality

96.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-75
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18843.7 best LPD28 45.5 6.80e-12 95.9% 63.9%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 43.0 3.34e-01 93.2% 80.2%
3doaA03 3.40.970.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like 0.50 30.0 3.38e-01 75.3% 95.3%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 35.0 3.01e-01 75.3% 93.1%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 3.42e-01 93.2% 95.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4660673 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 37.0 3.55e-01 71.2% 94.1%
3930134 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.53 40.0 3.71e-01 83.6% 63.2%
4194551 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 37.0 3.67e-01 72.6% 97.3%
4402716 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.52 36.0 3.51e-01 75.3% 89.4%
4010630 2004.1.1.10 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.51 37.0 2.39e-01 79.5% 51.4%