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IMGVR_UViG_2861686208_000001-2861686208-2861687220
Arc-VirIMGVR_UViG_2861686208_000001-2861686208-2861687220
Identity
- Kingdom:
- archaea
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 112-228
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 34.0 | 3.79e-01 | 95.7% | 67.7% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 34.0 | 3.67e-01 | 100.0% | 65.3% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 33.0 | 3.61e-01 | 96.6% | 70.4% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 3.77e-01 | 95.7% | 84.4% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 3.87e-01 | 86.3% | 91.7% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 3.31e-01 | 87.2% | 67.0% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 29.0 | 3.31e-01 | 86.3% | 76.2% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.65e-01 | 85.5% | 81.2% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 28.0 | 3.34e-01 | 83.8% | 80.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5025550 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 24.0 | 3.20e-01 | 84.6% | 62.5% |
| 4058379 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.57 | 26.0 | 3.43e-01 | 81.2% | 76.9% |
| 3589189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 30.0 | 3.02e-01 | 79.5% | 47.2% |
| 4070496 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.53 | 26.0 | 3.11e-01 | 82.1% | 69.3% |
| 3877589 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.53 | 25.0 | 3.34e-01 | 80.3% | 86.7% |
| 5256 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.52 | 28.0 | 3.47e-01 | 82.9% | 90.9% |
| 4646361 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.51 | 25.0 | 3.04e-01 | 81.2% | 72.9% |
| 5081186 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.51 | 28.0 | 3.36e-01 | 83.8% | 82.7% |
| 3606054 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 28.0 | 3.21e-01 | 83.8% | 72.9% |
| 5027689 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 26.0 | 3.05e-01 | 89.7% | 70.0% |
| 5027824 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.50 | 26.0 | 3.02e-01 | 95.7% | 68.2% |
| 2409924 | 7547.1.1.1 ↗ | a/b three-layered sandwiches › Hypothetical protein TT1679 › Hypothetical protein TT1679 › Hypothetical protein TT1679 › Antibiotic_NAT | 0.50 | 40.0 | 3.14e-01 | 87.2% | 81.2% |
D2
medium
residues 1-107