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IMGVR_UViG_2870879507_000002-2870879507-2870883269

Arc-Vir

IMGVR_UViG_2870879507_000002-2870879507-2870883269

Identity

Kingdom:
archaea

Quality

89.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-101
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8d3lA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.71 51.0 4.75e-01 88.7% 61.4%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 61.0 5.09e-01 100.0% 81.5%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.67 44.0 3.57e-01 85.9% 35.0%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.67 55.0 3.63e-01 98.6% 22.3%
2ghsA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 54.0 3.52e-01 100.0% 21.0%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 54.0 3.55e-01 100.0% 21.2%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 46.0 3.30e-01 74.6% 55.8%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 57.0 5.33e-01 100.0% 95.5%
7mi4A02 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.65 47.0 4.67e-01 90.1% 74.3%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 56.0 5.19e-01 100.0% 96.7%
7kfuC01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.65 47.0 4.66e-01 90.1% 73.3%
3ww7A00 2.40.10.500 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 49.0 4.75e-01 100.0% 74.4%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 49.0 4.29e-01 84.5% 98.1%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 54.0 4.58e-01 100.0% 79.8%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.63 48.0 4.44e-01 83.1% 98.9%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 49.0 3.17e-01 85.9% 91.2%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.75e-01 98.6% 100.0%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.62 44.0 3.34e-01 77.5% 88.9%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 4.48e-01 100.0% 87.9%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.61 52.0 4.33e-01 100.0% 91.0%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 54.0 3.54e-01 98.6% 27.9%
3tx4A02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.60 46.0 3.71e-01 83.1% 93.0%
1pguA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 44.0 3.01e-01 98.6% 20.3%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 39.0 2.81e-01 70.4% 21.2%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.47e-01 100.0% 28.2%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.47e-01 90.1% 74.5%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 41.0 2.83e-01 74.6% 94.6%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.25e-01 100.0% 26.8%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 49.0 3.24e-01 98.6% 31.9%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.57e-01 93.0% 55.3%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.57 41.0 3.27e-01 76.1% 51.4%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 51.0 3.28e-01 100.0% 30.8%
7sf2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.86e-01 78.9% 100.0%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.56 45.0 3.84e-01 87.3% 95.8%
4geqB00 3.30.160.430 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 37.0 4.00e-01 73.2% 81.0%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 42.0 3.55e-01 81.7% 56.5%
1gh2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 39.0 3.45e-01 74.6% 98.1%
4bhbA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.55 39.0 3.96e-01 74.6% 81.4%
1wrjA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.55 38.0 3.94e-01 74.6% 77.6%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 44.0 3.67e-01 93.0% 50.0%
7x68A01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.54 36.0 4.08e-01 81.7% 96.0%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.54 43.0 4.19e-01 91.5% 89.0%
3fhkA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 38.0 3.28e-01 76.1% 100.0%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 43.0 3.15e-01 94.4% 73.1%
1vclA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 39.0 3.33e-01 83.1% 99.3%
1zatA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.53 40.0 3.38e-01 83.1% 100.0%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.27e-01 97.2% 46.8%
3sqiA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.51 38.0 2.68e-01 85.9% 56.2%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3176830 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 63.0 5.45e-01 100.0% 88.2%
3734376 220.1.1.33 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.71 62.0 5.41e-01 100.0% 85.5%
3214213 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 60.0 5.38e-01 98.6% 98.0%
3792180 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 47.0 4.69e-01 71.8% 90.7%
4947399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.30e-01 94.4% 82.1%
3792816 220.1.1.33 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.67 58.0 4.95e-01 100.0% 78.3%
3427234 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.66 51.0 3.50e-01 94.4% 24.1%
3598346 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 51.0 3.96e-01 84.5% 87.3%
3789432 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 51.0 3.10e-01 84.5% 94.7%
3335997 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.65 46.0 3.78e-01 74.6% 70.8%
5003963 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.65 50.0 3.08e-01 83.1% 74.5%
4609836 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 4.10e-01 71.8% 57.6%
3510988 192.6.1.7 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › WSD 0.65 56.0 4.40e-01 100.0% 78.1%
3618917 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 54.0 4.77e-01 97.2% 93.6%
4927374 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 51.0 3.18e-01 100.0% 15.3%
4934826 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 51.0 3.36e-01 100.0% 20.7%
3693093 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.67e-01 100.0% 92.8%
4396276 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 49.0 4.39e-01 83.1% 60.0%
4029057 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 4.88e-01 100.0% 99.0%
3511439 220.1.1.193 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_UBFD1_C 0.63 53.0 4.68e-01 98.6% 81.4%
5047010 2008.1.1.63 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI 0.63 43.0 3.05e-01 70.4% 41.3%
3392173 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 51.0 3.38e-01 100.0% 22.1%
3706087 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.84e-01 81.7% 91.7%
3261868 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 49.0 3.67e-01 84.5% 50.0%
3814412 10.1.1.58 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.63 51.0 3.59e-01 88.7% 83.9%
3391728 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.63 45.0 4.28e-01 76.1% 98.8%
3381458 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.62 44.0 3.57e-01 74.6% 73.6%
4945655 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 55.0 4.93e-01 100.0% 83.0%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 46.0 4.32e-01 81.7% 97.8%
4336160 319.1.1.21 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › GvpH 0.61 44.0 4.30e-01 90.1% 68.8%
4133040 2484.2.1.1 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N 0.61 41.0 4.05e-01 71.8% 65.0%
3619880 5.1.3.140 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 0.61 54.0 3.51e-01 98.6% 30.3%
4088587 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.60 42.0 2.88e-01 90.1% 18.0%
5024619 5.1.4.64 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YNCE 0.60 54.0 3.14e-01 100.0% 13.1%
4023915 220.1.1.53 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.59 50.0 4.40e-01 100.0% 92.2%
3844416 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.59 50.0 3.12e-01 100.0% 16.9%
2225 5.1.4.405 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase, YNCE, choice_anch_I 0.59 53.0 3.47e-01 100.0% 28.2%
3536979 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.59 52.0 3.43e-01 98.6% 33.2%
1447892 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 48.0 4.06e-01 94.4% 89.9%
3237446 330.16.1.2 a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP 0.58 47.0 4.55e-01 90.1% 87.5%
4209885 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.58 41.0 3.32e-01 76.1% 62.7%
1875530 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.58 40.0 2.78e-01 71.8% 84.9%
3231483 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 49.0 3.62e-01 94.4% 54.1%
4026950 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 51.0 3.30e-01 100.0% 25.2%
4048802 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.58 51.0 2.85e-01 97.2% 9.0%
4215896 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.57 51.0 3.13e-01 100.0% 25.3%
3505083 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 49.0 3.09e-01 100.0% 18.9%
3927052 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.57 41.0 3.53e-01 88.7% 47.8%
4956688 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 39.0 3.19e-01 73.2% 80.0%
5006697 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 3.07e-01 93.0% 33.1%
3482448 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.55 48.0 3.67e-01 100.0% 78.9%
3483534 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 2.95e-01 93.0% 27.1%
3709086 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.55 40.0 3.38e-01 80.3% 44.6%
3604222 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.54 37.0 3.22e-01 70.4% 76.4%
4676634 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.54 42.0 2.72e-01 84.5% 61.8%
5013617 2003.2.1.1 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin 0.54 38.0 2.66e-01 74.6% 61.1%
4236664 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.53 46.0 3.59e-01 100.0% 74.5%
5048874 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.52 44.0 3.44e-01 98.6% 63.9%
5032518 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 39.0 3.64e-01 85.9% 96.8%