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IMGVR_UViG_2870879507_000002-2870879507-2870883290
Arc-VirIMGVR_UViG_2870879507_000002-2870879507-2870883290
Identity
- Kingdom:
- archaea
Quality
60.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-124
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.55e-01 | 100.0% | 74.7% |
| 1k28D02 | 3.55.50.20 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.51 | 42.0 | 3.75e-01 | 96.6% | 87.5% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 43.0 | 3.42e-01 | 100.0% | 80.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062643 | 101.1.2.138 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3860 | 0.59 | 50.0 | 4.62e-01 | 100.0% | 95.0% |
| 4994982 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.57 | 48.0 | 4.46e-01 | 98.3% | 82.7% |
| 4202053 | 3603.1.1.1 ↗ | alpha arrays › Uncharacterized protein AF_2093 N-terminal domain › Uncharacterized protein AF_2093 N-terminal domain › Uncharacterized protein AF_2093 N-terminal domain › DUF6846 | 0.56 | 46.0 | 3.86e-01 | 100.0% | 66.1% |
| 2482289 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.56 | 47.0 | 3.77e-01 | 100.0% | 70.5% |
| 3638091 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.89e-01 | 96.6% | 27.3% |
| 3719750 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.53 | 41.0 | 2.39e-01 | 91.4% | 28.4% |
| 3402499 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.53 | 37.0 | 3.47e-01 | 89.7% | 61.4% |
| 3981579 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 36.0 | 3.29e-01 | 74.1% | 72.5% |
| 3622481 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.52 | 42.0 | 3.53e-01 | 100.0% | 81.7% |
| 3385112 | 4309.1.1.0 ↗ | a+b complex topology › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases | 0.50 | 41.0 | 3.25e-01 | 94.8% | 78.2% |