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IMGVR_UViG_2875764417_000001-2875764417-2875765860

Arc-Vir

Identity

Accession:: IMGVR_UViG_2875764417_000001-2875764417-2875765860 ↗
Kingdom:: archaea

Quality

85.3 mean pLDDT

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-121

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4i1kA00	2.40.330.10	Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain	0.63	53.0	5.06e-01	99.0%	79.7%
1wiiA01	2.20.25.190	Mainly Beta › Single Sheet › N-terminal domain of TfIIb ›	0.62	27.0	3.36e-01	87.1%	62.9%
2vszB02	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.57	32.0	3.09e-01	91.1%	46.2%
3op1A02	2.40.30.30	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like	0.56	41.0	4.02e-01	89.1%	71.2%
3cpxA02	2.40.30.40	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2	0.55	34.0	4.00e-01	92.1%	98.4%
1h2cA00	2.70.20.20	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain	0.54	34.0	3.27e-01	89.1%	51.6%
4he6A00	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.54	39.0	4.17e-01	91.1%	87.6%
1a1xA00	2.40.15.10	Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1	0.53	42.0	4.19e-01	86.1%	94.3%
3w9kA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.52	40.0	3.65e-01	83.2%	97.0%
3kyhC01	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.51	38.0	2.87e-01	100.0%	33.3%
2hczX02	2.60.40.760	Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain	0.51	39.0	3.92e-01	100.0%	81.7%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4064772	1.1.3.1 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ	0.68	60.0	5.27e-01	98.0%	79.3%
3963810	1.1.3.1 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ	0.68	60.0	5.41e-01	98.0%	86.4%
4220105	1.1.3.1 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ	0.65	57.0	5.02e-01	98.0%	80.0%
3325228	1.1.11.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain	0.64	54.0	5.51e-01	100.0%	95.9%
3829560	1.1.11.6 ↗	beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239	0.64	57.0	5.52e-01	100.0%	94.7%
3804183	1.1.11.6 ↗	beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239	0.63	55.0	5.45e-01	98.0%	97.2%
3419133	1.1.11.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3	0.62	52.0	5.05e-01	96.0%	81.7%
3331569	375.1.1.31 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1	0.62	29.0	3.81e-01	90.1%	78.2%
4003738	59.1.1.8 ↗	beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_beta_N	0.57	33.0	3.33e-01	95.0%	55.2%
4266069	1.1.7.88 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963	0.55	46.0	4.60e-01	91.1%	96.2%
3738030	227.1.1.4 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1	0.53	36.0	3.35e-01	99.0%	53.3%
3602267	881.3.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Outer membrane-associated lipoprotein TP0453 › Outer membrane-associated lipoprotein TP0453	0.51	36.0	2.79e-01	96.0%	32.9%