←Back to structures
IMGVR_UViG_2875952388_000001-2875952388-2875952395
Arc-VirIMGVR_UViG_2875952388_000001-2875952388-2875952395
Identity
- Kingdom:
- archaea
Quality
83.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f98A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 44.0 | 3.62e-01 | 91.3% | 36.8% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 48.0 | 3.85e-01 | 91.3% | 38.8% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 34.0 | 2.88e-01 | 81.2% | 31.6% |
| 1a31A03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.58 | 36.0 | 2.80e-01 | 81.2% | 29.3% |
| 2qdeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 40.0 | 3.24e-01 | 73.9% | 90.4% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.56 | 40.0 | 3.62e-01 | 75.4% | 86.3% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 37.0 | 3.40e-01 | 91.3% | 53.3% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 40.0 | 3.23e-01 | 79.7% | 97.3% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 37.0 | 3.60e-01 | 91.3% | 61.7% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 38.0 | 3.46e-01 | 92.8% | 52.5% |
| 2qm0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 43.0 | 2.88e-01 | 84.1% | 59.2% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 42.0 | 3.53e-01 | 88.4% | 68.4% |
| 3mkcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 37.0 | 2.93e-01 | 71.0% | 92.4% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 40.0 | 3.08e-01 | 84.1% | 80.6% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 40.0 | 3.39e-01 | 87.0% | 91.6% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 38.0 | 3.13e-01 | 76.8% | 95.2% |
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 35.0 | 2.69e-01 | 94.2% | 28.1% |
| 3if8B03 | 6.20.270.10 | Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › | 0.52 | 32.0 | 3.48e-01 | 79.7% | 73.3% |
| 3iayA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.42e-01 | 78.3% | 73.5% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 38.0 | 3.04e-01 | 91.3% | 37.7% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 42.0 | 2.90e-01 | 91.3% | 52.4% |
| 3dohA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 3.02e-01 | 97.1% | 83.3% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.51 | 34.0 | 3.62e-01 | 91.3% | 82.5% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.10e-01 | 87.0% | 88.8% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 42.0 | 2.94e-01 | 100.0% | 74.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4103142 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.69 | 36.0 | 3.49e-01 | 76.8% | 43.8% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.68 | 39.0 | 4.32e-01 | 85.5% | 70.9% |
| 3514912 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.65 | 36.0 | 3.54e-01 | 78.3% | 48.0% |
| 4534466 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.64 | 34.0 | 3.08e-01 | 76.8% | 36.8% |
| 4382028 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 35.0 | 4.31e-01 | 82.6% | 95.0% |
| 3596303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 33.0 | 3.20e-01 | 78.3% | 45.3% |
| 4949036 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.59 | 38.0 | 4.28e-01 | 78.3% | 90.0% |
| 3973757 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.58 | 45.0 | 3.51e-01 | 85.5% | 91.9% |
| 3286878 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.58 | 46.0 | 3.53e-01 | 87.0% | 89.3% |
| 3934183 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.58 | 42.0 | 3.68e-01 | 92.8% | 50.5% |
| 3242288 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.58 | 40.0 | 3.02e-01 | 94.2% | 27.8% |
| 3484671 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.58 | 38.0 | 4.37e-01 | 87.0% | 92.0% |
| 3453961 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 45.0 | 2.83e-01 | 84.1% | 29.4% |
| 3875866 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.56 | 44.0 | 3.36e-01 | 87.0% | 85.9% |
| 3930641 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.54 | 40.0 | 3.49e-01 | 92.8% | 51.4% |
| 3991847 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 42.0 | 3.04e-01 | 92.8% | 29.0% |
| 3940239 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.54 | 44.0 | 3.93e-01 | 94.2% | 100.0% |
| 3928322 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 40.0 | 3.49e-01 | 92.8% | 51.4% |
| 5018913 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 43.0 | 3.61e-01 | 91.3% | 77.5% |
| 3912181 | 2004.1.1.174 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 | 0.52 | 42.0 | 2.95e-01 | 97.1% | 27.7% |
| 2771633 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 41.0 | 3.40e-01 | 91.3% | 84.7% |
| 3390155 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.51 | 44.0 | 4.14e-01 | 98.6% | 89.4% |
| 3275020 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 31.0 | 3.25e-01 | 95.7% | 66.2% |