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IMGVR_UViG_2904958054_000001-2904958054-2904958681

Arc-Vir

IMGVR_UViG_2904958054_000001-2904958054-2904958681

Identity

Kingdom:
archaea

Quality

87.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 200-295
PDB
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 6.02e-01 100.0% 63.2%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 5.94e-01 100.0% 62.5%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 5.87e-01 100.0% 62.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.76e-01 100.0% 60.3%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.63e-01 100.0% 56.2%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.19e-01 100.0% 71.5%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.87e-01 100.0% 62.6%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 6.59e-01 100.0% 87.8%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 6.45e-01 95.8% 81.9%
3u2rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.85e-01 100.0% 63.7%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 6.45e-01 100.0% 84.3%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 6.29e-01 83.3% 96.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.78e-01 100.0% 61.7%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.71e-01 100.0% 60.6%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.93e-01 100.0% 68.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.83e-01 100.0% 63.5%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.95e-01 100.0% 66.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 6.52e-01 100.0% 84.8%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.95e-01 99.0% 68.5%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.15e-01 100.0% 76.8%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.57e-01 100.0% 59.9%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.57e-01 100.0% 58.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.75e-01 100.0% 63.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 5.43e-01 88.5% 69.2%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.31e-01 100.0% 51.8%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 6.55e-01 95.8% 91.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.36e-01 100.0% 87.0%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.72e-01 100.0% 62.7%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.66e-01 93.8% 96.9%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.85e-01 96.9% 100.0%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.66e-01 100.0% 65.2%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.58e-01 97.9% 95.7%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 6.20e-01 81.2% 91.8%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.58e-01 100.0% 63.0%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.88e-01 94.8% 91.3%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 50.0 5.51e-01 79.2% 85.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 6.28e-01 97.9% 86.7%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 5.89e-01 85.4% 85.7%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.74 59.0 6.38e-01 88.5% 100.0%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 67.0 6.58e-01 100.0% 91.3%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 6.26e-01 99.0% 88.3%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 6.27e-01 95.8% 87.4%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 6.08e-01 79.2% 100.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 6.42e-01 94.8% 97.8%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.44e-01 89.6% 75.2%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.77e-01 94.8% 76.8%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.50e-01 100.0% 65.7%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 6.45e-01 94.8% 98.9%
1t6sB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.82e-01 89.6% 96.1%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.76e-01 92.7% 100.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.89e-01 95.8% 84.9%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.96e-01 97.9% 84.2%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 6.05e-01 100.0% 90.6%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 5.48e-01 80.2% 100.0%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.68e-01 99.0% 93.2%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.31e-01 96.9% 78.3%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 5.42e-01 96.9% 80.0%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.66 58.0 4.34e-01 93.8% 85.1%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.25e-01 91.7% 84.3%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.25e-01 99.0% 85.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.63 47.0 5.06e-01 79.2% 97.5%
4behA01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 39.0 4.55e-01 87.5% 93.8%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 5.15e-01 94.8% 90.0%
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 48.0 3.63e-01 85.4% 33.6%
1vpwA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 36.0 4.36e-01 99.0% 98.2%
1qduB00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.58 37.0 3.84e-01 79.2% 70.5%
3i5pA03 1.20.120.1880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain 0.57 42.0 3.12e-01 77.1% 59.0%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 3.41e-01 74.0% 61.2%
1sw2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 38.0 3.21e-01 71.9% 45.8%
3o66B01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 38.0 3.26e-01 74.0% 45.8%
3e54A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 47.0 4.02e-01 97.9% 59.7%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.54 32.0 3.49e-01 87.5% 72.4%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.52 35.0 3.57e-01 79.2% 69.5%
4bc3A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 45.0 3.58e-01 100.0% 59.6%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 29.0 3.12e-01 70.8% 63.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 67.0 6.42e-01 95.8% 79.6%
4373647 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.79 71.0 6.57e-01 97.9% 92.5%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.79 73.0 6.70e-01 100.0% 90.0%
5027116 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.78 72.0 6.78e-01 100.0% 90.4%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.78 69.0 6.88e-01 96.9% 95.0%
3594005 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 65.0 5.41e-01 97.9% 52.7%
5036311 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.78 71.0 7.00e-01 97.9% 95.0%
5055466 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.78 72.0 6.75e-01 100.0% 95.7%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.88e-01 96.9% 98.9%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 72.0 6.84e-01 100.0% 90.0%
5065786 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 71.0 6.58e-01 100.0% 82.5%
4995581 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 66.0 6.56e-01 95.8% 89.0%
4934055 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 60.0 6.50e-01 91.7% 100.0%
5000349 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 71.0 6.56e-01 100.0% 80.8%
5033207 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 70.0 6.34e-01 97.9% 97.6%
4955909 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 71.0 6.78e-01 100.0% 91.8%
3875839 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 72.0 6.70e-01 100.0% 96.5%
4944051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.44e-01 99.0% 52.9%
5029327 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 71.0 6.56e-01 100.0% 91.7%
4284507 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 70.0 6.76e-01 97.9% 100.0%
3602364 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.77 66.0 6.85e-01 97.9% 100.0%
5005164 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 69.0 6.61e-01 97.9% 90.7%
5011183 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 71.0 6.74e-01 100.0% 91.8%
5077121 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 62.0 6.30e-01 92.7% 88.4%
4979490 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 70.0 6.47e-01 100.0% 84.2%
4974161 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 70.0 6.40e-01 100.0% 81.5%
4928669 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 70.0 6.80e-01 100.0% 93.3%
5049515 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 70.0 6.56e-01 100.0% 87.8%
4926994 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.76 63.0 6.20e-01 99.0% 82.7%
3927517 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 68.0 6.72e-01 96.9% 95.0%
4943364 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 70.0 6.37e-01 100.0% 82.1%
4173782 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 69.0 6.52e-01 100.0% 87.8%
4971686 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 65.0 6.33e-01 95.8% 85.7%
2409292 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 65.0 6.37e-01 97.9% 86.5%
4983310 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 64.0 6.35e-01 100.0% 88.0%
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 64.0 6.51e-01 100.0% 94.7%
4934296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 59.0 5.72e-01 85.4% 76.2%
5026783 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 69.0 6.86e-01 100.0% 96.0%
4979997 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 64.0 5.69e-01 100.0% 65.0%
3824526 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 6.01e-01 100.0% 82.2%
5005519 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 66.0 6.23e-01 97.9% 80.7%
4975513 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 68.0 6.53e-01 100.0% 92.7%
4982781 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 68.0 6.48e-01 100.0% 90.9%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 64.0 6.29e-01 96.9% 86.7%
5053457 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 63.0 4.94e-01 96.9% 45.1%
5081950 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 68.0 6.37e-01 100.0% 87.0%
3550228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.55e-01 89.6% 69.2%
3645708 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.74 66.0 6.21e-01 97.9% 93.9%
5044892 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 66.0 6.19e-01 97.9% 80.9%
3587894 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.74 62.0 5.00e-01 91.7% 49.1%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 65.0 6.04e-01 96.9% 78.3%
4978596 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 65.0 5.96e-01 96.9% 75.2%
4959713 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 63.0 6.04e-01 97.9% 82.4%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 64.0 6.27e-01 95.8% 87.4%
4983039 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 6.56e-01 97.9% 96.0%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 66.0 5.57e-01 100.0% 60.0%
4314672 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 65.0 6.33e-01 100.0% 88.6%
4478972 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 64.0 6.12e-01 96.9% 83.6%
5077022 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 63.0 6.22e-01 95.8% 90.0%
3515049 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.73 65.0 5.70e-01 97.9% 94.3%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 64.0 5.19e-01 100.0% 51.7%
4978090 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 64.0 4.89e-01 100.0% 43.3%
3164764 2008.1.1.168 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 0.72 59.0 6.24e-01 89.6% 100.0%
5072114 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 63.0 5.40e-01 97.9% 60.7%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 5.49e-01 100.0% 62.5%
4934352 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 61.0 4.98e-01 95.8% 50.3%
5082903 101.1.2.275 alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.72 65.0 6.49e-01 100.0% 95.0%
5046461 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 64.0 4.98e-01 99.0% 46.5%
2494143 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 61.0 5.87e-01 95.8% 81.1%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 63.0 4.92e-01 100.0% 44.8%
4960288 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 62.0 5.08e-01 94.8% 69.1%
4999532 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 65.0 4.84e-01 100.0% 42.6%
3956796 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.72 62.0 4.99e-01 94.8% 67.6%
3587826 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 63.0 6.04e-01 95.8% 85.2%
5065235 101.1.2.738 alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C 0.71 59.0 4.74e-01 94.8% 46.5%
5041315 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 62.0 6.19e-01 95.8% 92.0%
4625648 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 61.0 5.91e-01 94.8% 83.5%
4959456 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 64.0 5.27e-01 100.0% 81.2%
3449813 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.85e-01 80.2% 100.0%
4991742 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 62.0 5.59e-01 95.8% 70.8%
5077851 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 63.0 5.44e-01 99.0% 84.0%
5047364 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 61.0 5.89e-01 100.0% 83.6%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.02e-01 96.9% 52.2%
4976218 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.80e-01 97.9% 79.2%
3868765 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.70 57.0 5.77e-01 87.5% 92.6%
5054914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 64.0 6.10e-01 100.0% 93.6%
4945099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 5.70e-01 99.0% 75.2%
3670673 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 62.0 5.95e-01 97.9% 100.0%
3940545 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.70 62.0 5.48e-01 97.9% 94.3%
4998174 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.04e-01 100.0% 52.8%
3443787 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 5.51e-01 82.3% 89.4%
5082386 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 60.0 5.53e-01 96.9% 76.6%
5044353 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 6.07e-01 100.0% 94.0%
4503351 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.97e-01 100.0% 91.4%
5060792 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 60.0 5.53e-01 99.0% 77.4%
3463151 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 60.0 5.26e-01 100.0% 75.9%
3280466 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 59.0 4.74e-01 100.0% 49.5%
3206556 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.67 60.0 4.41e-01 100.0% 38.0%
3465836 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.78e-01 97.9% 94.0%
3688689 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.66 60.0 5.40e-01 100.0% 79.2%
D2 high residues 296-463
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04471.19 best Mrr_cat 36.6 6.00e-09 72.6% 91.3%
PF13156.13 Mrr_cat_2 22.1 1.60e-04 69.6% 73.2%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vldA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.81 51.0 6.38e-01 70.2% 99.1%
4f0qA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.76 60.0 5.75e-01 81.5% 71.4%
2w42B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 44.0 4.58e-01 83.9% 67.7%
7kx9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 45.0 4.85e-01 83.9% 77.1%
5flmE01 3.40.1340.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain 0.67 51.0 5.59e-01 77.4% 100.0%
4p1zA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 44.0 4.98e-01 86.3% 87.4%
3vnaA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 46.0 4.93e-01 86.9% 81.1%
1dzfA01 3.40.1340.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain 0.66 50.0 5.50e-01 78.0% 100.0%
3ds8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 49.0 4.26e-01 86.3% 93.3%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 41.0 4.52e-01 94.0% 88.9%
2xheA02 3.40.50.1910 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 2 0.58 43.0 4.15e-01 78.0% 85.8%
4jgbB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.76e-01 99.4% 97.6%
1nf7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 41.0 3.02e-01 76.8% 79.1%
3abzA02 3.40.50.1700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain 0.55 42.0 4.18e-01 86.3% 76.3%
2gn4B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.43e-01 100.0% 89.7%
4ggmX02 3.40.140.80 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain 0.55 39.0 4.13e-01 81.5% 82.7%
1udxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 4.28e-01 85.1% 92.0%
7b7pA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.53 43.0 3.75e-01 86.3% 92.8%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 4.02e-01 90.5% 89.0%
6hxqB01 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.53 43.0 4.35e-01 95.8% 86.5%
3dnfA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.53 32.0 3.95e-01 75.0% 100.0%
1pdoA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.53 34.0 3.73e-01 81.5% 82.2%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 38.0 3.83e-01 73.8% 85.5%
3hnoA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 43.0 3.97e-01 88.1% 69.2%
2b78A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 4.26e-01 95.2% 99.5%
5v1qB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 3.67e-01 88.7% 85.3%
2f48A01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 46.0 3.89e-01 96.4% 91.9%
3gaaB00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.52 41.0 3.68e-01 85.1% 73.1%
8ea4D01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 4.01e-01 91.7% 81.8%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.51 33.0 3.62e-01 81.5% 80.8%
3nntA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 46.0 4.02e-01 97.6% 79.4%
7tbvB02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.98e-01 93.5% 78.3%
3ny7A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.51 35.0 3.99e-01 82.7% 98.3%
3obwA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.51 32.0 3.71e-01 80.4% 89.0%
2gnoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 4.11e-01 95.2% 94.9%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4951715 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.86 58.0 6.98e-01 73.8% 100.0%
4997067 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.85 53.0 6.74e-01 71.4% 100.0%
3956485 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.84 63.0 6.48e-01 81.5% 80.6%
4940782 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.84 57.0 6.80e-01 84.5% 100.0%
4963007 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.83 63.0 6.57e-01 83.3% 83.2%
5017801 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.83 59.0 6.53e-01 85.1% 89.6%
4942817 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.83 58.0 6.77e-01 82.7% 99.2%
4938798 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.83 60.0 6.46e-01 81.5% 85.5%
4931034 2008.1.1.5 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C 0.82 54.0 6.52e-01 73.2% 96.5%
5000631 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.82 52.0 6.31e-01 81.0% 93.9%
4945273 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.82 53.0 6.54e-01 75.6% 100.0%
5057130 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.82 55.0 6.39e-01 77.4% 92.0%
3945413 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.81 73.0 7.35e-01 96.4% 93.5%
4976606 2008.3.1.2 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › Mrr_cat 0.81 54.0 6.35e-01 75.6% 93.3%
4963533 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.81 54.0 6.40e-01 82.7% 95.0%
4943645 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.81 57.0 6.65e-01 80.4% 100.0%
5014682 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.81 60.0 6.79e-01 83.9% 98.5%
3270711 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.80 54.0 6.11e-01 82.1% 87.7%
4969199 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.80 56.0 6.61e-01 81.0% 100.0%
4972924 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.78 53.0 6.34e-01 76.8% 100.0%
5055610 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.77 60.0 6.64e-01 88.1% 99.3%
5031240 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.77 56.0 6.42e-01 81.0% 100.0%
4955318 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.76 53.0 6.00e-01 78.6% 92.2%
5081086 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.76 59.0 6.35e-01 80.4% 94.5%
4969547 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.75 59.0 6.12e-01 81.5% 92.5%
3743329 2008.1.1.82 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 0.75 66.0 6.45e-01 98.2% 86.1%
4973776 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.75 61.0 6.42e-01 84.5% 100.0%
4941784 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.74 54.0 5.96e-01 78.6% 91.9%
5078654 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 51.0 5.91e-01 92.9% 98.3%
4934112 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 55.0 6.17e-01 82.1% 100.0%
3266028 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.73 47.0 5.43e-01 84.5% 90.0%
5016947 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 61.0 5.75e-01 88.1% 96.0%
5009806 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 60.0 5.56e-01 86.3% 97.6%
4046444 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 54.0 5.26e-01 76.2% 87.8%
4964457 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.72 49.0 5.66e-01 83.9% 92.8%
4024248 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.72 52.0 6.06e-01 75.0% 100.0%
4949337 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 57.0 5.08e-01 82.7% 79.1%
4934478 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 54.0 6.02e-01 84.5% 98.5%
3719011 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.71 55.0 5.39e-01 79.8% 97.8%
3596034 2008.3.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain 0.71 53.0 5.43e-01 77.4% 97.6%
3594188 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.71 53.0 5.42e-01 76.2% 99.4%
4016425 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.69 47.0 4.54e-01 87.5% 61.1%
4947458 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 55.0 5.95e-01 83.9% 98.6%
3437627 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.69 50.0 5.78e-01 76.2% 100.0%
1891681 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.69 46.0 4.64e-01 84.5% 66.9%
3937631 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.68 52.0 5.67e-01 78.0% 98.6%
3731717 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.68 51.0 5.34e-01 77.4% 98.7%
5073524 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 57.0 5.96e-01 92.9% 98.1%
3717987 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 56.0 4.97e-01 88.1% 91.3%
4950269 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 59.0 5.25e-01 92.9% 76.5%
3705622 2008.1.1.118 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RHSP 0.67 55.0 4.38e-01 86.9% 66.1%
3573735 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.67 45.0 5.33e-01 82.1% 100.0%
3405128 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.67 46.0 4.66e-01 84.5% 70.9%
4962492 2008.1.1.234 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26437 0.66 55.0 5.35e-01 88.7% 89.7%
364974 2008.3.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Eukaryotic RPB5 N-terminal domain › Eukaryotic RPB5 N-terminal domain › RNA_pol_Rpb5_N 0.64 50.0 5.37e-01 79.8% 97.2%
3520053 7590.1.1.3 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid 0.64 45.0 4.48e-01 85.1% 68.6%
3685090 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.63 45.0 4.51e-01 87.5% 71.8%
3785575 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.62 47.0 4.47e-01 85.7% 67.2%
3704044 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 48.0 4.28e-01 88.7% 85.3%
3938086 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.58 47.0 3.41e-01 86.3% 87.6%
3282659 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 37.0 4.14e-01 79.2% 81.5%
4969385 2007.2.1.6 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 0.57 44.0 4.60e-01 82.7% 94.3%
4975717 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 44.0 4.41e-01 82.1% 90.9%
3583362 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.56 47.0 4.64e-01 89.3% 89.1%
4954442 7570.1.1.0 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain 0.53 38.0 4.03e-01 92.9% 84.8%
4078594 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.52 38.0 3.73e-01 73.8% 80.0%
3976549 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.52 39.0 3.62e-01 90.5% 62.4%
4052713 2487.1.1.18 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Peptidase_S66C 0.51 37.0 3.97e-01 73.2% 96.4%
4487278 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.50 45.0 4.14e-01 97.0% 86.8%
5052615 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.50 41.0 3.84e-01 87.5% 84.8%
D3 medium residues 1-192
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 28.0 4.25e-01 95.8% 93.8%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.54 31.0 3.82e-01 81.8% 87.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3583002 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.78 30.0 5.04e-01 92.2% 100.0%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.74 33.0 4.97e-01 72.9% 100.0%
5044812 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.59e-01 99.0% 73.3%
5011499 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 26.0 4.45e-01 89.6% 98.5%
5000306 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 32.0 4.71e-01 97.4% 96.5%
5040315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 30.0 4.31e-01 97.4% 84.4%
3830975 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 27.0 4.36e-01 98.4% 98.6%
4927049 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 32.0 4.34e-01 98.4% 85.0%
3555783 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.68 31.0 4.34e-01 75.5% 88.2%
3889516 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.67 33.0 4.38e-01 81.2% 85.7%
4991793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.63e-01 94.8% 90.7%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 31.0 4.48e-01 83.9% 100.0%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 33.0 4.21e-01 97.9% 79.2%
3995560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 32.0 4.59e-01 73.4% 100.0%
5064993 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 32.0 3.98e-01 96.9% 75.0%
3670739 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.61 35.0 3.85e-01 80.7% 67.5%
4030520 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 30.0 3.87e-01 92.2% 96.5%
3479146 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 34.0 3.53e-01 94.8% 72.6%