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IMGVR_UViG_2904983472_000001-2904983472-2904987685
Arc-VirIMGVR_UViG_2904983472_000001-2904983472-2904987685
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-93
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26442.2 best | Halo_toxin | 46.0 | 7.40e-12 | 85.7% | 92.3% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 56.0 | 5.40e-01 | 86.9% | 90.4% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 57.0 | 3.57e-01 | 100.0% | 37.0% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 35.0 | 4.30e-01 | 88.1% | 92.3% |
| 5c3vA01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.58 | 49.0 | 4.00e-01 | 95.2% | 100.0% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 37.0 | 4.01e-01 | 89.3% | 78.6% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 35.0 | 3.93e-01 | 84.5% | 86.4% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 43.0 | 3.32e-01 | 83.3% | 86.4% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 33.0 | 3.49e-01 | 88.1% | 65.8% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 34.0 | 3.59e-01 | 89.3% | 69.9% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 30.0 | 3.57e-01 | 89.3% | 84.9% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 34.0 | 3.88e-01 | 86.9% | 94.8% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 44.0 | 2.90e-01 | 94.0% | 36.0% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 47.0 | 3.15e-01 | 100.0% | 36.5% |
| 1whzA00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.52 | 33.0 | 3.61e-01 | 86.9% | 78.3% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 3.10e-01 | 100.0% | 46.7% |
| 2y9fA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 44.0 | 3.77e-01 | 100.0% | 90.6% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 40.0 | 4.10e-01 | 89.3% | 91.7% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.68e-01 | 96.4% | 85.8% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 46.0 | 3.05e-01 | 100.0% | 36.3% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 45.0 | 3.06e-01 | 100.0% | 42.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001968 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.68 | 53.0 | 5.70e-01 | 88.1% | 100.0% |
| 3347851 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 36.0 | 3.92e-01 | 88.1% | 67.1% |
| 5062732 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.63 | 52.0 | 5.22e-01 | 90.5% | 90.6% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.62 | 37.0 | 3.97e-01 | 91.7% | 68.0% |
| 3963560 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.62 | 42.0 | 4.87e-01 | 73.8% | 98.3% |
| 3627280 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.61 | 36.0 | 3.79e-01 | 90.5% | 65.3% |
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.61 | 34.0 | 3.49e-01 | 100.0% | 57.5% |
| 3680499 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.58 | 50.0 | 2.83e-01 | 94.0% | 56.5% |
| 4656512 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.58 | 39.0 | 4.46e-01 | 73.8% | 96.7% |
| 3963561 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.57 | 40.0 | 4.33e-01 | 77.4% | 88.6% |
| 3260943 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 36.0 | 3.98e-01 | 100.0% | 78.6% |
| 3790148 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.56 | 38.0 | 4.01e-01 | 98.8% | 78.7% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.55 | 37.0 | 3.02e-01 | 96.4% | 38.0% |
| 3429270 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.55 | 47.0 | 2.91e-01 | 94.0% | 97.3% |
| 3264337 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 43.0 | 3.08e-01 | 85.7% | 98.8% |
| 279006 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 35.0 | 3.76e-01 | 85.7% | 79.7% |
| 3516397 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.53 | 41.0 | 3.22e-01 | 83.3% | 57.8% |
| 4944226 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 41.0 | 4.36e-01 | 95.2% | 93.3% |
| 3940470 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.52 | 46.0 | 3.00e-01 | 100.0% | 42.8% |
| 3653643 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.51 | 40.0 | 3.78e-01 | 100.0% | 68.6% |
| 3060582 | 5.1.4.58 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF5074 | 0.50 | 45.0 | 2.99e-01 | 100.0% | 31.6% |
| 1289816 | 5.1.4.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Glu_cyclase_2 | 0.50 | 46.0 | 3.21e-01 | 100.0% | 43.3% |