←Back to structures
IMGVR_UViG_2904991991_000001-2904991991-2904995982
Arc-VirIMGVR_UViG_2904991991_000001-2904991991-2904995982
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-87
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.58 | 48.0 | 4.22e-01 | 94.3% | 61.7% |
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.09e-01 | 100.0% | 76.8% |
| 4gwmB03 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.55 | 45.0 | 3.52e-01 | 94.3% | 80.5% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 45.0 | 4.01e-01 | 100.0% | 66.7% |
| 1acxA00 | 2.60.40.230 | Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like | 0.52 | 45.0 | 3.97e-01 | 100.0% | 95.4% |
| 2m4vA00 | 2.20.28.270 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A | 0.52 | 32.0 | 3.15e-01 | 87.1% | 53.8% |
| 3e9tB00 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.51 | 44.0 | 3.84e-01 | 100.0% | 92.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.20e-01 | 94.3% | 91.7% |
| 3fq4B01 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.50 | 43.0 | 3.74e-01 | 100.0% | 93.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930528 | 11.1.1.1432 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 | 0.59 | 52.0 | 4.41e-01 | 100.0% | 72.5% |
| 3413442 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 37.0 | 3.46e-01 | 88.6% | 51.8% |
| 4931876 | 11.1.1.1432 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 | 0.59 | 52.0 | 4.74e-01 | 100.0% | 89.5% |
| 3375203 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.58 | 50.0 | 3.39e-01 | 100.0% | 32.4% |
| 3390499 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 46.0 | 3.72e-01 | 94.3% | 64.3% |
| 3586784 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 48.0 | 4.17e-01 | 100.0% | 89.1% |
| 3003909 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.54 | 42.0 | 3.39e-01 | 94.3% | 76.2% |
| 3209918 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.53 | 46.0 | 4.03e-01 | 100.0% | 92.7% |
| 3896326 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.52 | 42.0 | 3.25e-01 | 94.3% | 76.1% |
| 4959654 | 11.1.1.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta | 0.52 | 45.0 | 3.99e-01 | 100.0% | 93.3% |
| 3582580 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 44.0 | 3.76e-01 | 97.1% | 92.2% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 3.86e-01 | 94.3% | 91.4% |
| 3499673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.82e-01 | 100.0% | 94.8% |
| 3602915 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 4.13e-01 | 100.0% | 88.4% |
| 3176001 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.50 | 42.0 | 3.12e-01 | 100.0% | 83.8% |
| 3697382 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.25e-01 | 100.0% | 93.3% |