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IMGVR_UViG_2905025277_000001-2905025277-2905027265
Arc-VirIMGVR_UViG_2905025277_000001-2905025277-2905027265
Identity
- Kingdom:
- archaea
Quality
82.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 147-212
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 54.0 | 5.56e-01 | 74.2% | 65.1% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 52.0 | 5.40e-01 | 74.2% | 67.2% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 51.0 | 5.15e-01 | 74.2% | 63.1% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 49.0 | 4.15e-01 | 74.2% | 39.0% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 46.0 | 5.53e-01 | 71.2% | 97.6% |
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 55.0 | 5.13e-01 | 78.8% | 79.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 48.0 | 4.59e-01 | 74.2% | 56.4% |
| 3bz6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 4.67e-01 | 75.8% | 71.1% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.72 | 51.0 | 4.65e-01 | 75.8% | 73.0% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 5.51e-01 | 75.8% | 100.0% |
| 2vmaA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.69 | 55.0 | 4.41e-01 | 84.8% | 61.5% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.47e-01 | 75.8% | 64.0% |
| 2xubA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.35e-01 | 77.3% | 69.6% |
| 2hqrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.13e-01 | 80.3% | 59.4% |
| 2imgA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.64 | 47.0 | 3.65e-01 | 78.8% | 87.9% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 41.0 | 4.41e-01 | 78.8% | 76.8% |
| 3on3B00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.64 | 45.0 | 3.37e-01 | 74.2% | 90.3% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.62 | 44.0 | 3.28e-01 | 77.3% | 88.6% |
| 6vvoC03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.61 | 46.0 | 4.20e-01 | 83.3% | 71.4% |
| 1xeqB00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.61 | 42.0 | 3.97e-01 | 74.2% | 85.9% |
| 4eqyA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.60 | 42.0 | 4.15e-01 | 74.2% | 77.1% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.59 | 42.0 | 3.70e-01 | 74.2% | 56.6% |
| 7eqeB01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 48.0 | 3.72e-01 | 100.0% | 77.5% |
| 2bbrA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 38.0 | 3.46e-01 | 71.2% | 93.3% |
| 2lpeA02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.56 | 42.0 | 4.16e-01 | 89.4% | 76.1% |
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.56 | 38.0 | 3.36e-01 | 72.7% | 51.0% |
| 5diyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.11e-01 | 100.0% | 44.5% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 38.0 | 4.24e-01 | 72.7% | 96.0% |
| 3qw4B02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 45.0 | 3.31e-01 | 98.5% | 57.8% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.53 | 42.0 | 3.94e-01 | 89.4% | 70.9% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.68e-01 | 87.9% | 66.3% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.52 | 36.0 | 2.98e-01 | 72.7% | 93.5% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 33.0 | 3.56e-01 | 83.3% | 100.0% |
| 7crnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 2.91e-01 | 95.5% | 46.3% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 43.0 | 2.94e-01 | 98.5% | 96.9% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3207944 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 65.0 | 7.44e-01 | 74.2% | 96.0% |
| 4017824 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.88 | 63.0 | 5.99e-01 | 74.2% | 66.7% |
| 4011476 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 62.0 | 5.97e-01 | 74.2% | 66.7% |
| 3636036 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 59.0 | 6.17e-01 | 72.7% | 80.0% |
| 4336182 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 51.0 | 4.52e-01 | 74.2% | 45.6% |
| 3669523 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.81 | 58.0 | 5.86e-01 | 74.2% | 96.9% |
| 3833695 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.81 | 55.0 | 4.85e-01 | 71.2% | 50.5% |
| 4113660 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.80 | 57.0 | 6.38e-01 | 75.8% | 98.0% |
| 3295625 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.80 | 57.0 | 4.81e-01 | 74.2% | 47.6% |
| 3584520 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 56.0 | 4.69e-01 | 74.2% | 46.4% |
| 3270548 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.79 | 58.0 | 6.13e-01 | 77.3% | 86.7% |
| 4996283 | 101.43.1.4 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › HTH_AsnC-type | 0.79 | 56.0 | 5.65e-01 | 74.2% | 76.9% |
| 4982179 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.78 | 57.0 | 4.87e-01 | 77.3% | 81.9% |
| 3261605 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.78 | 56.0 | 5.26e-01 | 75.8% | 76.2% |
| 3178452 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 54.0 | 5.44e-01 | 72.7% | 76.9% |
| 3932714 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.77 | 55.0 | 4.95e-01 | 75.8% | 62.2% |
| 3262460 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.77 | 57.0 | 3.51e-01 | 78.8% | 19.7% |
| 3723263 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 54.0 | 5.37e-01 | 74.2% | 75.7% |
| 5040994 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 54.0 | 5.18e-01 | 74.2% | 86.7% |
| 3481256 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 54.0 | 4.52e-01 | 74.2% | 60.0% |
| 3925766 | 101.1.1.103 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 | 0.75 | 53.0 | 5.08e-01 | 74.2% | 65.3% |
| 2138992 | 182.1.3.1 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › PriX | 0.74 | 54.0 | 4.56e-01 | 77.3% | 51.4% |
| 3737247 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.74 | 52.0 | 3.59e-01 | 74.2% | 40.9% |
| 3479827 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 52.0 | 4.77e-01 | 75.8% | 62.5% |
| 3935995 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.72 | 51.0 | 4.94e-01 | 75.8% | 73.3% |
| 3403406 | 101.1.1.103 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 | 0.72 | 50.0 | 5.57e-01 | 74.2% | 98.0% |
| 3940696 | 101.1.1.103 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 | 0.72 | 50.0 | 5.51e-01 | 72.7% | 96.0% |
| 3992442 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.70 | 48.0 | 4.44e-01 | 77.3% | 55.3% |
| 3473294 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.70 | 58.0 | 5.54e-01 | 95.5% | 77.3% |
| 5064030 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.70 | 50.0 | 4.43e-01 | 75.8% | 60.0% |
| 3787848 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.69 | 52.0 | 4.93e-01 | 80.3% | 82.1% |
| 3676992 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 49.0 | 3.22e-01 | 77.3% | 19.0% |
| 3741782 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 46.0 | 3.92e-01 | 72.7% | 42.6% |
| 5067381 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.68 | 47.0 | 3.08e-01 | 72.7% | 59.6% |
| 3170895 | 2004.1.3.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.67 | 48.0 | 3.30e-01 | 77.3% | 73.5% |
| 4571183 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 57.0 | 4.89e-01 | 95.5% | 78.1% |
| 3525815 | 101.1.2.265 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stork_head | 0.66 | 47.0 | 4.27e-01 | 77.3% | 63.2% |
| 3505632 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.66 | 50.0 | 4.75e-01 | 83.3% | 72.5% |
| 4946851 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 3.92e-01 | 80.3% | 52.3% |
| 3815745 | 592.6.1.1 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug | 0.64 | 45.0 | 4.26e-01 | 74.2% | 63.7% |
| 3239957 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.64 | 46.0 | 3.43e-01 | 77.3% | 82.9% |
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.63 | 44.0 | 4.23e-01 | 75.8% | 70.0% |
| 3202292 | 101.38.1.3 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › DUF6891 | 0.63 | 48.0 | 4.80e-01 | 84.8% | 85.7% |
| 3291410 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.62 | 43.0 | 4.22e-01 | 74.2% | 68.0% |
| 5072071 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 4.35e-01 | 75.8% | 81.4% |
| 4932388 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.62 | 44.0 | 4.25e-01 | 75.8% | 70.7% |
| 3575307 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 44.0 | 3.88e-01 | 75.8% | 92.0% |
| 4956886 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.61 | 45.0 | 3.58e-01 | 80.3% | 38.6% |
| 4949988 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.61 | 48.0 | 3.73e-01 | 84.8% | 59.3% |
| 3382974 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.61 | 43.0 | 3.74e-01 | 75.8% | 58.1% |
| 4943989 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 41.0 | 3.15e-01 | 75.8% | 55.6% |
| 3736233 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.53 | 42.0 | 2.81e-01 | 92.4% | 38.1% |
| 5011671 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 37.0 | 3.30e-01 | 77.3% | 97.0% |
D2
medium
residues 62-105
Domain cluster:
rep: IMGVR_UViG_3300009451_000380-3300009451-Ga0127402_10049042__D125-168
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.71 | 48.0 | 4.35e-01 | 70.5% | 71.7% |
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.70 | 49.0 | 4.50e-01 | 77.3% | 57.9% |
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.67 | 50.0 | 5.08e-01 | 81.8% | 83.7% |
| 2pptA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.65 | 47.0 | 4.95e-01 | 77.3% | 91.9% |
| 1t0fA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 49.0 | 3.41e-01 | 90.9% | 51.2% |
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.62 | 45.0 | 4.49e-01 | 79.5% | 84.4% |
| 3kk4A01 | 1.10.3990.20 | Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 | 0.59 | 47.0 | 3.64e-01 | 90.9% | 50.5% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.59 | 42.0 | 3.56e-01 | 72.7% | 60.3% |
| 2dulA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 2.45e-01 | 77.3% | 10.7% |
| 4frfA00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.58 | 46.0 | 3.01e-01 | 93.2% | 27.6% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 41.0 | 4.16e-01 | 79.5% | 95.6% |
| 2mknA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 39.0 | 3.94e-01 | 79.5% | 75.0% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 2.61e-01 | 72.7% | 22.2% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 38.0 | 3.10e-01 | 81.8% | 37.5% |
| 6kjcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 40.0 | 2.45e-01 | 93.2% | 54.7% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 46.0 | 3.06e-01 | 100.0% | 86.1% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 37.0 | 2.39e-01 | 72.7% | 45.7% |
| 4mtdA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.53 | 38.0 | 3.50e-01 | 79.5% | 85.7% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 38.0 | 2.34e-01 | 90.9% | 11.2% |
| 4efoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 44.0 | 3.60e-01 | 100.0% | 97.8% |
| 2b9dA01 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.74e-01 | 79.5% | 100.0% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.43e-01 | 100.0% | 45.2% |
| 4c1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 39.0 | 2.41e-01 | 100.0% | 26.9% |
| 1ff9A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 41.0 | 2.86e-01 | 100.0% | 64.6% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004198 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.82 | 61.0 | 6.56e-01 | 84.1% | 100.0% |
| 5004690 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 56.0 | 5.99e-01 | 84.1% | 100.0% |
| 3922469 | 604.1.1.200 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Ima1_N | 0.70 | 49.0 | 4.62e-01 | 75.0% | 85.5% |
| 3862499 | 192.29.1.117 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Ima1_N | 0.70 | 49.0 | 4.60e-01 | 79.5% | 60.0% |
| 4072720 | 375.6.1.1 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › FlhC | 0.70 | 47.0 | 5.06e-01 | 70.5% | 91.4% |
| 3337279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 51.0 | 5.43e-01 | 79.5% | 100.0% |
| 4155531 | 377.1.1.15 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YacG | 0.69 | 50.0 | 4.81e-01 | 79.5% | 68.0% |
| 5065789 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 5.09e-01 | 81.8% | 87.5% |
| 4061693 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.67 | 49.0 | 3.70e-01 | 81.8% | 90.4% |
| 3921494 | 376.1.3.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-CW | 0.67 | 48.0 | 4.66e-01 | 77.3% | 88.0% |
| 3623773 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.67 | 48.0 | 3.87e-01 | 77.3% | 48.2% |
| 3889954 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 50.0 | 4.77e-01 | 81.8% | 72.0% |
| 3596234 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 4.72e-01 | 81.8% | 85.0% |
| 3506203 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.63 | 43.0 | 4.60e-01 | 75.0% | 88.6% |
| 3596419 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.63 | 46.0 | 4.71e-01 | 81.8% | 100.0% |
| 4940877 | 377.1.1.130 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf_Tbcl_2 | 0.62 | 45.0 | 4.88e-01 | 79.5% | 100.0% |
| 4965624 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.62 | 43.0 | 2.69e-01 | 72.7% | 12.7% |
| 3706365 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 46.0 | 4.46e-01 | 84.1% | 100.0% |
| 3241842 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 52.0 | 4.01e-01 | 100.0% | 96.2% |
| 5058727 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 3.01e-01 | 75.0% | 37.9% |
| 5071300 | 601.27.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like | 0.60 | 45.0 | 3.12e-01 | 88.6% | 57.2% |
| 3479114 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 44.0 | 2.45e-01 | 84.1% | 93.9% |
| 3495822 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 45.0 | 3.25e-01 | 84.1% | 54.8% |
| 3215316 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 48.0 | 3.76e-01 | 100.0% | 95.1% |
| 3624872 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.56 | 42.0 | 2.99e-01 | 86.4% | 58.0% |
| 3756763 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.55 | 36.0 | 2.24e-01 | 75.0% | 9.5% |
| 4197141 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.54 | 39.0 | 3.13e-01 | 81.8% | 56.0% |
| 5038241 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.54 | 41.0 | 2.64e-01 | 84.1% | 28.4% |
| 4067487 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.54 | 39.0 | 3.22e-01 | 86.4% | 69.5% |
| 3766109 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 37.0 | 3.62e-01 | 81.8% | 64.0% |
| 4946681 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.53 | 38.0 | 2.31e-01 | 90.9% | 9.5% |
| 5077136 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.52 | 39.0 | 2.91e-01 | 84.1% | 42.5% |
| 3288416 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.51 | 42.0 | 3.32e-01 | 100.0% | 47.6% |
| 4472719 | 171.1.1.9 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 | 0.50 | 41.0 | 2.72e-01 | 100.0% | 40.0% |