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IMGVR_UViG_2905025277_000001-2905025277-2905027300
Arc-VirIMGVR_UViG_2905025277_000001-2905025277-2905027300
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-162
Domain cluster:
rep: MT764210__UXF49854.1__7841G1D8-26__00026__D257-398
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.84 | 65.0 | 7.14e-01 | 99.4% | 96.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.81 | 63.0 | 6.75e-01 | 100.0% | 91.9% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.77 | 58.0 | 6.38e-01 | 100.0% | 95.3% |
| 2lfpA01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.71 | 54.0 | 5.78e-01 | 99.4% | 91.9% |
| 3ct9A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 36.0 | 4.25e-01 | 86.7% | 71.0% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 37.0 | 4.40e-01 | 88.0% | 75.5% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 36.0 | 4.26e-01 | 92.4% | 74.8% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 38.0 | 4.40e-01 | 91.1% | 75.0% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.67 | 34.0 | 4.35e-01 | 96.8% | 81.9% |
| 2w59B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 36.0 | 4.20e-01 | 88.0% | 72.8% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 34.0 | 3.89e-01 | 70.9% | 66.4% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.64 | 60.0 | 5.44e-01 | 100.0% | 78.6% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 35.0 | 4.07e-01 | 88.0% | 73.2% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 36.0 | 4.20e-01 | 87.3% | 78.6% |
| 4nasB01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.63 | 37.0 | 4.29e-01 | 94.3% | 80.5% |
| 4illB01 | 2.40.30.310 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 38.0 | 4.34e-01 | 88.0% | 81.0% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 31.0 | 3.89e-01 | 93.0% | 79.8% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 40.0 | 4.44e-01 | 93.7% | 79.7% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 31.0 | 3.52e-01 | 92.4% | 60.7% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 34.0 | 3.93e-01 | 86.7% | 72.8% |
| 5k8mA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 37.0 | 4.06e-01 | 91.8% | 74.0% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.59 | 39.0 | 3.90e-01 | 87.3% | 64.5% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.59 | 35.0 | 4.35e-01 | 98.1% | 96.8% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.57 | 33.0 | 3.92e-01 | 86.1% | 85.3% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 29.0 | 3.53e-01 | 83.5% | 76.0% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.98e-01 | 89.9% | 75.9% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.54 | 45.0 | 3.54e-01 | 90.5% | 52.5% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.54 | 41.0 | 3.84e-01 | 79.1% | 89.1% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 33.0 | 4.11e-01 | 98.7% | 100.0% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.53 | 35.0 | 3.64e-01 | 96.2% | 68.4% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 32.0 | 3.57e-01 | 100.0% | 74.6% |
| 5mghA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 48.0 | 3.89e-01 | 100.0% | 83.4% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 47.0 | 3.94e-01 | 100.0% | 81.0% |
| 1b7yA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 47.0 | 3.96e-01 | 100.0% | 89.1% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 31.0 | 3.57e-01 | 96.2% | 81.9% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 33.0 | 3.51e-01 | 96.8% | 74.6% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 47.0 | 4.21e-01 | 100.0% | 94.8% |
| 3icaB00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 46.0 | 4.20e-01 | 98.1% | 99.5% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.50 | 45.0 | 4.14e-01 | 100.0% | 81.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2642577 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.84 | 66.0 | 7.10e-01 | 100.0% | 94.8% |
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.83 | 63.0 | 6.99e-01 | 99.4% | 97.6% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.81 | 63.0 | 6.79e-01 | 100.0% | 93.3% |
| 4883824 | 304.124.1.6 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF5072 | 0.81 | 58.0 | 6.33e-01 | 100.0% | 89.1% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.81 | 68.0 | 7.09e-01 | 100.0% | 95.2% |
| 3966645 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.79 | 58.0 | 6.51e-01 | 98.1% | 96.0% |
| 4034595 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.79 | 57.0 | 6.51e-01 | 98.7% | 98.3% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.77 | 65.0 | 6.66e-01 | 100.0% | 92.0% |
| 5083880 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.73 | 61.0 | 6.35e-01 | 100.0% | 95.9% |
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.71 | 59.0 | 6.22e-01 | 100.0% | 97.1% |
| 3604270 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.71 | 34.0 | 3.78e-01 | 100.0% | 56.2% |
| 4971865 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.69 | 40.0 | 4.51e-01 | 92.4% | 74.2% |
| 5026741 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.68 | 40.0 | 4.54e-01 | 92.4% | 75.0% |
| 4961625 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.68 | 38.0 | 4.39e-01 | 88.0% | 74.8% |
| 4935602 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.66 | 39.0 | 4.45e-01 | 92.4% | 76.7% |
| 5074961 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.65 | 41.0 | 4.49e-01 | 92.4% | 76.2% |
| 4977974 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 41.0 | 4.50e-01 | 91.8% | 77.7% |
| 5028112 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 40.0 | 4.37e-01 | 92.4% | 75.4% |
| 5075193 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 40.0 | 4.43e-01 | 88.6% | 79.2% |
| 3699728 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.62 | 34.0 | 3.89e-01 | 77.8% | 70.0% |
| 4481559 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 38.0 | 4.15e-01 | 91.8% | 75.4% |
| 4055405 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 37.0 | 4.07e-01 | 93.0% | 76.8% |
| 3388283 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.58 | 36.0 | 3.63e-01 | 100.0% | 60.0% |
| 5048630 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 37.0 | 4.01e-01 | 93.7% | 74.1% |
| 3592320 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.58 | 39.0 | 4.08e-01 | 91.8% | 75.7% |
| 4025736 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 34.0 | 3.95e-01 | 85.4% | 82.6% |
| 3207181 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 29.0 | 3.68e-01 | 99.4% | 85.6% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.56 | 45.0 | 4.83e-01 | 97.5% | 100.0% |
| 3970688 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 31.0 | 3.81e-01 | 86.1% | 86.0% |
| 3971531 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.55 | 35.0 | 3.82e-01 | 92.4% | 74.8% |
| 3652827 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.55 | 34.0 | 3.64e-01 | 99.4% | 71.1% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 45.0 | 4.76e-01 | 96.8% | 98.6% |
| 5020942 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.54 | 36.0 | 3.60e-01 | 100.0% | 64.1% |
| 3496203 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.53 | 32.0 | 3.93e-01 | 97.5% | 95.0% |
| 3962890 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 28.0 | 3.10e-01 | 100.0% | 63.2% |
| 3385898 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.52 | 37.0 | 3.75e-01 | 100.0% | 73.5% |
| 4324371 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 40.0 | 3.04e-01 | 82.3% | 51.0% |
| 3384696 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 46.0 | 4.47e-01 | 100.0% | 86.7% |
| 5034752 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.51 | 41.0 | 3.91e-01 | 85.4% | 79.3% |
| 3492448 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.51 | 31.0 | 3.80e-01 | 94.9% | 97.0% |
| 3919160 | 872.3.1.8 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3, YbjQ_4 | 0.51 | 32.0 | 2.98e-01 | 93.0% | 48.3% |