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IMGVR_UViG_2914868299_000002-2914868299-2914872410
Arc-VirIMGVR_UViG_2914868299_000002-2914868299-2914872410
Identity
- Kingdom:
- archaea
Quality
62.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 351-426
D2
medium
residues 208-264
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00096.33 best | zf-C2H2 | 20.7 | 5.90e-04 | 36.8% | 87.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jkzA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.56 | 39.0 | 4.20e-01 | 93.0% | 91.3% |
| 2mc3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.10e-01 | 73.7% | 74.8% |
| 7y7oA01 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.53 | 41.0 | 3.12e-01 | 86.0% | 95.8% |
| 2ghfA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 44.0 | 3.87e-01 | 98.2% | 86.5% |
| 6ba1B01 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.51 | 40.0 | 2.54e-01 | 87.7% | 90.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3543152 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.91 | 40.0 | 5.85e-01 | 86.0% | 100.0% |
| 3901679 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.88 | 42.0 | 3.09e-01 | 100.0% | 20.0% |
| 3416974 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.80 | 48.0 | 4.95e-01 | 91.2% | 63.6% |
| 3477831 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.80 | 39.0 | 4.84e-01 | 87.7% | 77.1% |
| 3247085 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 42.0 | 4.32e-01 | 96.5% | 60.0% |
| 3569637 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.62 | 45.0 | 4.33e-01 | 100.0% | 67.7% |
| 3546019 | 386.1.1.378 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, FOXP-CC, zf-C2H2_15 | 0.61 | 44.0 | 3.71e-01 | 98.2% | 47.8% |
| 3731208 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.60 | 44.0 | 3.66e-01 | 98.2% | 46.3% |
| 3766036 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 51.0 | 4.88e-01 | 94.7% | 90.8% |
| 3524086 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.57 | 44.0 | 3.09e-01 | 82.5% | 29.1% |
| 3815163 | 387.1.5.15 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SLR1-BP | 0.57 | 39.0 | 4.18e-01 | 73.7% | 92.0% |
| 3710951 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.54 | 49.0 | 4.04e-01 | 100.0% | 96.0% |
| 4001918 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 45.0 | 4.33e-01 | 100.0% | 81.5% |
| 3628457 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 47.0 | 4.49e-01 | 98.2% | 96.9% |
| 4997766 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.50 | 35.0 | 2.93e-01 | 71.9% | 57.1% |
D3
medium
residues 278-331