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IMGVR_UViG_2918192969_000001-2918192969-2918194556
Arc-VirIMGVR_UViG_2918192969_000001-2918192969-2918194556
Identity
- Kingdom:
- archaea
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-161
Domain cluster:
rep: NC_048198.1__YP_009824082.1__HOV55_gp52__00052__D63-230
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 32.0 | 4.48e-01 | 84.0% | 86.5% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 36.0 | 4.90e-01 | 73.7% | 94.9% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 33.0 | 4.80e-01 | 91.7% | 100.0% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 36.0 | 4.88e-01 | 82.1% | 96.2% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 35.0 | 4.86e-01 | 82.1% | 100.0% |
| 2pgcA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 41.0 | 4.83e-01 | 82.7% | 84.9% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.69 | 38.0 | 4.87e-01 | 80.8% | 93.3% |
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 39.0 | 4.91e-01 | 82.1% | 95.5% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 40.0 | 4.87e-01 | 82.7% | 90.7% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 35.0 | 4.71e-01 | 84.0% | 96.2% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 37.0 | 4.78e-01 | 88.5% | 95.3% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 32.0 | 4.46e-01 | 82.1% | 92.0% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 35.0 | 4.60e-01 | 82.7% | 93.8% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.68 | 44.0 | 4.73e-01 | 85.3% | 76.1% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 41.0 | 4.86e-01 | 82.7% | 92.2% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 31.0 | 4.31e-01 | 83.3% | 92.0% |
| 2r4fA03 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.65 | 43.0 | 4.87e-01 | 84.6% | 88.9% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.65 | 41.0 | 4.86e-01 | 83.3% | 93.4% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 37.0 | 4.55e-01 | 82.1% | 92.5% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 29.0 | 4.14e-01 | 84.0% | 95.5% |
| 5t0oA03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.64 | 40.0 | 4.82e-01 | 81.4% | 96.0% |
| 4c98A01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 37.0 | 4.45e-01 | 84.6% | 84.8% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.64 | 39.0 | 4.52e-01 | 85.9% | 86.1% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 4.53e-01 | 82.7% | 91.0% |
| 2di7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 34.0 | 3.97e-01 | 94.9% | 73.8% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 38.0 | 4.44e-01 | 82.7% | 86.8% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.45e-01 | 82.7% | 90.7% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 29.0 | 3.33e-01 | 88.5% | 57.9% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.63 | 32.0 | 4.12e-01 | 76.9% | 88.1% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.49e-01 | 82.7% | 91.8% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.44e-01 | 82.7% | 92.6% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 33.0 | 4.25e-01 | 83.3% | 88.9% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.62 | 31.0 | 4.24e-01 | 81.4% | 98.6% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.62 | 32.0 | 4.06e-01 | 81.4% | 88.1% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 36.0 | 4.48e-01 | 82.1% | 92.9% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.61 | 49.0 | 3.67e-01 | 84.0% | 57.2% |
| 5abxA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.61 | 39.0 | 3.80e-01 | 89.7% | 56.6% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 39.0 | 4.56e-01 | 87.2% | 93.3% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.61 | 42.0 | 4.68e-01 | 82.7% | 92.4% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.61 | 28.0 | 3.82e-01 | 82.7% | 86.8% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.61 | 32.0 | 3.98e-01 | 82.7% | 83.9% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 35.0 | 4.39e-01 | 87.2% | 98.9% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 32.0 | 4.00e-01 | 82.1% | 86.5% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.60 | 38.0 | 3.31e-01 | 82.7% | 41.0% |
| 2qv6A01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.59 | 44.0 | 4.82e-01 | 89.1% | 92.2% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 36.0 | 4.19e-01 | 82.7% | 87.6% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 29.0 | 3.15e-01 | 82.7% | 54.0% |
| 2a6mA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.59 | 38.0 | 4.10e-01 | 82.7% | 76.9% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 4.47e-01 | 82.7% | 97.1% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 42.0 | 4.20e-01 | 89.1% | 70.6% |
| 3pjxA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 45.0 | 4.31e-01 | 89.7% | 69.6% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.58 | 31.0 | 4.03e-01 | 82.1% | 95.1% |
| 4kc3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 31.0 | 3.81e-01 | 81.4% | 83.2% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 37.0 | 4.32e-01 | 82.1% | 93.5% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 43.0 | 4.42e-01 | 89.1% | 81.9% |
| 2fyxA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.56 | 40.0 | 4.37e-01 | 87.8% | 88.5% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 27.0 | 3.71e-01 | 76.3% | 93.3% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 41.0 | 4.30e-01 | 87.8% | 82.6% |
| 7uzsX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 3.83e-01 | 81.4% | 74.0% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.90e-01 | 89.1% | 72.6% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 26.0 | 3.10e-01 | 100.0% | 66.0% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 43.0 | 3.98e-01 | 84.0% | 68.9% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 42.0 | 3.99e-01 | 82.7% | 89.1% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 44.0 | 4.12e-01 | 90.4% | 71.4% |
| 2fgeA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 41.0 | 3.56e-01 | 82.7% | 65.7% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 45.0 | 3.94e-01 | 94.9% | 77.4% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 27.0 | 3.52e-01 | 87.8% | 92.9% |
| 1iq4A00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 39.0 | 3.75e-01 | 82.7% | 69.8% |
| 2gv9B04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.51 | 42.0 | 3.91e-01 | 88.5% | 90.4% |
| 1q8iA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.51 | 39.0 | 3.57e-01 | 84.0% | 60.8% |
| 2g47A04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 41.0 | 3.56e-01 | 86.5% | 84.2% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.51 | 32.0 | 3.49e-01 | 82.1% | 78.5% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591115 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.73 | 45.0 | 5.49e-01 | 82.7% | 95.0% |
| 3831152 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 46.0 | 5.60e-01 | 81.4% | 99.0% |
| 1142016 | 304.44.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C | 0.72 | 40.0 | 5.15e-01 | 84.6% | 95.5% |
| 3700805 | 304.9.1.107 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › FAZ1_cons | 0.71 | 41.0 | 5.24e-01 | 76.3% | 98.9% |
| 4447636 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.69 | 39.0 | 4.94e-01 | 82.7% | 94.4% |
| 4981301 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.69 | 40.0 | 4.95e-01 | 89.1% | 92.6% |
| 3704046 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.68 | 39.0 | 4.85e-01 | 76.9% | 92.6% |
| 3231858 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.67 | 42.0 | 5.00e-01 | 87.8% | 95.0% |
| 3412376 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 43.0 | 4.84e-01 | 82.7% | 85.2% |
| 4031401 | 304.28.1.13 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL | 0.66 | 42.0 | 4.91e-01 | 87.2% | 90.0% |
| 3907671 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 33.0 | 4.52e-01 | 82.7% | 97.3% |
| 3520411 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.66 | 42.0 | 4.92e-01 | 82.7% | 90.9% |
| 3701167 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.66 | 50.0 | 5.49e-01 | 91.0% | 98.4% |
| 3978064 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.66 | 34.0 | 4.51e-01 | 82.1% | 95.0% |
| 3746623 | 304.9.1.87 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30891 | 0.65 | 43.0 | 5.08e-01 | 84.0% | 95.5% |
| 5052894 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.65 | 37.0 | 4.58e-01 | 81.4% | 91.4% |
| 3605908 | 304.31.1.3 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › FAZ1_cons | 0.64 | 46.0 | 5.12e-01 | 82.1% | 94.2% |
| 5027042 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.64 | 35.0 | 4.47e-01 | 82.7% | 93.2% |
| 3526003 | 304.9.1.87 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30891 | 0.64 | 44.0 | 5.00e-01 | 82.7% | 93.9% |
| 3934872 | 3122.1.1.2 ↗ | a+b complex topology › MESD › MESD › MESD › SCVP | 0.64 | 41.0 | 4.86e-01 | 90.4% | 96.2% |
| 3540722 | 304.44.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › JAG1 | 0.64 | 42.0 | 4.78e-01 | 82.1% | 89.6% |
| 3164241 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.64 | 35.0 | 4.52e-01 | 82.1% | 93.3% |
| 4026401 | 878.1.1.7 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Pro_sub2 | 0.63 | 36.0 | 4.25e-01 | 77.6% | 81.0% |
| 3571539 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.63 | 40.0 | 4.75e-01 | 82.7% | 97.0% |
| 4070229 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.63 | 40.0 | 4.74e-01 | 87.8% | 90.9% |
| 3413474 | 304.9.1.95 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4780 | 0.63 | 39.0 | 4.70e-01 | 85.9% | 98.9% |
| 3329735 | 327.11.2.37 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st | 0.63 | 29.0 | 4.07e-01 | 89.7% | 94.3% |
| 3485848 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.62 | 38.0 | 4.75e-01 | 97.4% | 100.0% |
| 3839917 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.62 | 35.0 | 4.15e-01 | 82.7% | 80.0% |
| 4374017 | 304.49.1.1 ↗ | a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD_N | 0.62 | 45.0 | 4.59e-01 | 88.5% | 75.5% |
| 3738492 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.62 | 30.0 | 4.22e-01 | 90.4% | 96.0% |
| 4987385 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.62 | 33.0 | 4.24e-01 | 88.5% | 88.9% |
| 4995243 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.62 | 31.0 | 4.21e-01 | 76.9% | 96.0% |
| 3207719 | 2002.1.1.262 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SGT1 | 0.62 | 44.0 | 4.28e-01 | 91.0% | 65.1% |
| 4481044 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 48.0 | 4.09e-01 | 82.1% | 96.5% |
| 3725076 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 38.0 | 4.39e-01 | 82.7% | 86.2% |
| 3724729 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 39.0 | 4.26e-01 | 82.7% | 75.4% |
| 3955398 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.62 | 41.0 | 4.75e-01 | 82.7% | 95.5% |
| 3413369 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.61 | 44.0 | 4.79e-01 | 82.7% | 88.5% |
| 3195155 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 30.0 | 4.12e-01 | 91.7% | 100.0% |
| 3973541 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 37.0 | 4.44e-01 | 82.7% | 95.8% |
| 3289745 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.61 | 37.0 | 4.51e-01 | 82.7% | 97.9% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.61 | 42.0 | 4.75e-01 | 82.7% | 94.8% |
| 4355727 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.60 | 45.0 | 4.72e-01 | 76.3% | 90.0% |
| 5039535 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.60 | 32.0 | 4.07e-01 | 76.9% | 91.8% |
| 3992422 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 43.0 | 4.76e-01 | 87.2% | 92.0% |
| 3613400 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.59 | 43.0 | 4.77e-01 | 82.7% | 96.7% |
| 3235660 | 304.151.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 | 0.59 | 45.0 | 4.97e-01 | 82.7% | 98.4% |
| 3839278 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.59 | 42.0 | 4.62e-01 | 92.3% | 94.2% |
| 3885537 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.58 | 30.0 | 3.89e-01 | 91.0% | 96.0% |
| 4116969 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.58 | 47.0 | 4.34e-01 | 89.7% | 67.0% |
| 4928095 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.57 | 38.0 | 4.31e-01 | 89.7% | 88.2% |
| 3766383 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.57 | 40.0 | 4.54e-01 | 87.2% | 94.2% |
| 3165297 | 304.55.2.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp | 0.57 | 36.0 | 3.87e-01 | 82.7% | 72.6% |
| 3971826 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.57 | 44.0 | 4.06e-01 | 82.7% | 76.1% |
| 4047925 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.56 | 38.0 | 4.31e-01 | 82.7% | 93.0% |
| 1168087 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 34.0 | 3.86e-01 | 82.1% | 82.6% |
| 5035779 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 40.0 | 4.44e-01 | 88.5% | 100.0% |
| 3636564 | 304.25.1.8 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › SGT1 | 0.53 | 45.0 | 4.17e-01 | 91.7% | 84.5% |
| 4926825 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.53 | 30.0 | 3.48e-01 | 89.1% | 77.1% |
| 5039708 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 47.0 | 4.31e-01 | 96.8% | 91.2% |
| 3185440 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.52 | 44.0 | 3.86e-01 | 90.4% | 85.2% |
| 5063044 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.52 | 40.0 | 3.91e-01 | 82.7% | 89.1% |
| 3937694 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.51 | 46.0 | 3.88e-01 | 98.7% | 72.8% |
| 3744247 | 101.1.11.112 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SGT1 | 0.51 | 43.0 | 4.00e-01 | 91.7% | 83.6% |
| 3605282 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 43.0 | 4.08e-01 | 90.4% | 97.2% |
| 3607101 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.50 | 41.0 | 3.67e-01 | 89.1% | 80.3% |
D2
high
residues 163-235
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 77.0 | 7.20e-01 | 100.0% | 93.3% |
| 4ah6A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 78.0 | 6.57e-01 | 100.0% | 76.3% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 69.0 | 6.69e-01 | 100.0% | 80.0% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 67.0 | 6.09e-01 | 100.0% | 66.7% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 69.0 | 6.09e-01 | 100.0% | 64.7% |
| 1wydA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 75.0 | 6.62e-01 | 100.0% | 78.4% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 74.0 | 6.07e-01 | 100.0% | 69.5% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 74.0 | 6.47e-01 | 100.0% | 79.2% |
| 1quqB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 67.0 | 5.70e-01 | 100.0% | 57.0% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 72.0 | 5.79e-01 | 100.0% | 55.1% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 72.0 | 6.23e-01 | 100.0% | 74.3% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.78 | 70.0 | 6.38e-01 | 100.0% | 75.3% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 71.0 | 5.50e-01 | 100.0% | 58.7% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 70.0 | 6.24e-01 | 100.0% | 81.2% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 71.0 | 5.94e-01 | 100.0% | 63.6% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 70.0 | 5.94e-01 | 100.0% | 74.1% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 54.0 | 5.93e-01 | 91.8% | 93.1% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 69.0 | 6.27e-01 | 100.0% | 87.5% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 69.0 | 6.40e-01 | 100.0% | 84.6% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 60.0 | 6.43e-01 | 94.5% | 100.0% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 69.0 | 5.65e-01 | 100.0% | 82.7% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 69.0 | 5.58e-01 | 100.0% | 64.1% |
| 4mtnA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 60.0 | 6.35e-01 | 90.4% | 100.0% |
| 3tdqA00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.74 | 63.0 | 5.99e-01 | 100.0% | 79.1% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 61.0 | 6.38e-01 | 95.9% | 98.5% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 66.0 | 6.13e-01 | 100.0% | 84.8% |
| 2c35B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 66.0 | 6.11e-01 | 98.6% | 100.0% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 62.0 | 6.19e-01 | 93.2% | 90.5% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 58.0 | 6.12e-01 | 100.0% | 98.4% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 63.0 | 6.49e-01 | 98.6% | 100.0% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 62.0 | 5.85e-01 | 98.6% | 80.0% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 53.0 | 5.77e-01 | 97.3% | 100.0% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.71 | 63.0 | 6.32e-01 | 98.6% | 98.7% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 62.0 | 5.71e-01 | 97.3% | 90.4% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 53.0 | 5.39e-01 | 94.5% | 83.1% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 50.0 | 4.86e-01 | 93.2% | 66.3% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 56.0 | 5.75e-01 | 94.5% | 91.4% |
| 2q2tA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 60.0 | 5.36e-01 | 98.6% | 98.1% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 55.0 | 5.75e-01 | 98.6% | 100.0% |
| 1khiA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 58.0 | 5.92e-01 | 97.3% | 95.8% |
| 4rfbA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 61.0 | 6.06e-01 | 100.0% | 100.0% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 60.0 | 6.00e-01 | 100.0% | 95.9% |
| 2rdgA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 59.0 | 6.02e-01 | 100.0% | 100.0% |
| 2nttA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 58.0 | 5.92e-01 | 98.6% | 98.6% |
| 1iyjB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 60.0 | 5.22e-01 | 100.0% | 78.1% |
| 3er0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 57.0 | 5.76e-01 | 98.6% | 93.2% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 53.0 | 5.54e-01 | 98.6% | 100.0% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 54.0 | 5.69e-01 | 95.9% | 100.0% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.68 | 46.0 | 4.98e-01 | 97.3% | 87.9% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 58.0 | 5.53e-01 | 95.9% | 100.0% |
| 2cqoA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 59.0 | 5.55e-01 | 100.0% | 87.0% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 49.0 | 5.23e-01 | 78.1% | 95.3% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 57.0 | 5.76e-01 | 100.0% | 100.0% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.65 | 57.0 | 5.77e-01 | 98.6% | 97.3% |
| 5i4dA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 57.0 | 5.68e-01 | 100.0% | 100.0% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 53.0 | 5.35e-01 | 95.9% | 98.7% |
| 2vnuD01 | 2.40.50.690 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 54.0 | 4.86e-01 | 95.9% | 77.7% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.62 | 55.0 | 5.28e-01 | 100.0% | 86.9% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 50.0 | 4.92e-01 | 98.6% | 94.9% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 40.0 | 3.12e-01 | 71.2% | 52.5% |
| 5ejrA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 35.0 | 3.43e-01 | 100.0% | 60.0% |
| 2h1qA01 | 3.30.390.100 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 40.0 | 3.45e-01 | 87.7% | 66.4% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027788 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.87 | 67.0 | 6.11e-01 | 100.0% | 63.4% |
| 4987604 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.87 | 76.0 | 6.93e-01 | 100.0% | 72.6% |
| 4947047 | 2.1.1.357 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA-synt_2 | 0.86 | 80.0 | 7.41e-01 | 100.0% | 92.2% |
| 4974478 | 2.1.1.379 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26045 | 0.85 | 68.0 | 5.89e-01 | 100.0% | 58.1% |
| 4932470 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.85 | 79.0 | 7.28e-01 | 100.0% | 91.1% |
| 4969369 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.85 | 78.0 | 6.40e-01 | 100.0% | 64.0% |
| 3991355 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.83 | 77.0 | 6.59e-01 | 100.0% | 75.5% |
| 4943514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 70.0 | 6.78e-01 | 100.0% | 82.5% |
| 137535 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.83 | 70.0 | 6.10e-01 | 100.0% | 62.9% |
| 4995609 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 75.0 | 5.93e-01 | 100.0% | 64.1% |
| 4338502 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.82 | 75.0 | 6.06e-01 | 100.0% | 64.4% |
| 5031432 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.82 | 75.0 | 6.56e-01 | 100.0% | 76.2% |
| 3098017 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 69.0 | 5.86e-01 | 100.0% | 58.4% |
| 5058404 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 68.0 | 5.89e-01 | 100.0% | 60.0% |
| 4956522 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 74.0 | 6.28e-01 | 100.0% | 64.3% |
| 5040985 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 68.0 | 6.59e-01 | 98.6% | 83.7% |
| 4052975 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 73.0 | 6.27e-01 | 100.0% | 72.7% |
| 5043053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.32e-01 | 100.0% | 81.0% |
| 4965400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.05e-01 | 100.0% | 62.5% |
| 4465652 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 5.87e-01 | 100.0% | 57.7% |
| 4250626 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 71.0 | 5.77e-01 | 100.0% | 55.6% |
| 4994745 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.61e-01 | 100.0% | 81.9% |
| 4940586 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.02e-01 | 100.0% | 72.5% |
| 3471516 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 73.0 | 5.69e-01 | 100.0% | 56.6% |
| 4930094 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 72.0 | 6.35e-01 | 100.0% | 83.8% |
| 4953042 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.79 | 53.0 | 5.18e-01 | 91.8% | 63.7% |
| 4041632 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 71.0 | 5.63e-01 | 100.0% | 62.8% |
| 5062443 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 70.0 | 6.59e-01 | 100.0% | 82.4% |
| 3483454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 72.0 | 5.94e-01 | 100.0% | 66.1% |
| 4948720 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 72.0 | 6.07e-01 | 100.0% | 69.8% |
| 5054442 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 71.0 | 6.78e-01 | 100.0% | 87.1% |
| 5076905 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 70.0 | 6.38e-01 | 100.0% | 74.7% |
| 4074664 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 70.0 | 6.10e-01 | 100.0% | 79.1% |
| 4159859 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.78 | 71.0 | 6.33e-01 | 100.0% | 84.0% |
| 4974931 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 70.0 | 5.91e-01 | 100.0% | 64.2% |
| 4441925 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 70.0 | 5.55e-01 | 100.0% | 56.6% |
| 4026507 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 71.0 | 5.73e-01 | 100.0% | 56.4% |
| 4417682 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 70.0 | 5.67e-01 | 100.0% | 60.0% |
| 3261728 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.77 | 70.0 | 5.62e-01 | 100.0% | 64.5% |
| 3680255 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.77 | 71.0 | 6.11e-01 | 100.0% | 69.7% |
| 3439083 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.77 | 65.0 | 5.27e-01 | 100.0% | 50.8% |
| 3878186 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.77 | 71.0 | 5.62e-01 | 100.0% | 64.0% |
| 3482760 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 70.0 | 5.64e-01 | 100.0% | 62.2% |
| 3588305 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 69.0 | 6.39e-01 | 97.3% | 84.3% |
| 3356732 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.76 | 70.0 | 5.84e-01 | 100.0% | 60.8% |
| 4966111 | 2.1.1.378 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 | 0.76 | 67.0 | 6.66e-01 | 97.3% | 98.7% |
| 4983065 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 70.0 | 6.03e-01 | 100.0% | 68.8% |
| 3801549 | 2.1.1.224 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29084 | 0.76 | 65.0 | 5.50e-01 | 100.0% | 58.3% |
| 4966850 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 67.0 | 6.26e-01 | 97.3% | 80.0% |
| 5042273 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 69.0 | 5.97e-01 | 100.0% | 67.3% |
| 5064427 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 69.0 | 5.94e-01 | 100.0% | 74.5% |
| 3739002 | 2.1.1.123 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 | 0.75 | 68.0 | 6.47e-01 | 100.0% | 85.9% |
| 4432123 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.75 | 53.0 | 4.95e-01 | 100.0% | 60.0% |
| 4376273 | 2.14.1.1 ↗ | beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC | 0.75 | 52.0 | 4.92e-01 | 98.6% | 60.0% |
| 144492 | 2.1.1.64 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Fimbrial_PilY2 | 0.74 | 63.0 | 5.99e-01 | 100.0% | 79.1% |
| 3799466 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 64.0 | 6.11e-01 | 100.0% | 82.4% |
| 5072770 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 54.0 | 5.58e-01 | 97.3% | 82.9% |
| None | — | 0.73 | 64.0 | 6.52e-01 | 98.6% | 100.0% | |
| 4168836 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.73 | 59.0 | 6.06e-01 | 98.6% | 94.3% |
| 3604141 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 57.0 | 5.72e-01 | 95.9% | 84.9% |
| None | — | 0.72 | 64.0 | 6.13e-01 | 100.0% | 84.7% | |
| 5017092 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.72 | 56.0 | 5.92e-01 | 97.3% | 95.4% |
| 3496962 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 6.01e-01 | 100.0% | 87.8% |
| 5042551 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 53.0 | 5.65e-01 | 97.3% | 92.1% |
| 4192004 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.71 | 62.0 | 6.30e-01 | 97.3% | 98.6% |
| 4983078 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 52.0 | 5.23e-01 | 93.2% | 76.0% |
| 5072874 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 54.0 | 5.69e-01 | 98.6% | 92.3% |
| 4956851 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 54.0 | 5.65e-01 | 95.9% | 90.8% |
| 5006052 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 53.0 | 5.59e-01 | 94.5% | 90.6% |
| 5042879 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.71 | 57.0 | 6.03e-01 | 93.2% | 100.0% |
| 397140 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.71 | 62.0 | 5.90e-01 | 98.6% | 81.8% |
| 4926790 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.71 | 53.0 | 5.35e-01 | 100.0% | 80.0% |
| 4996015 | 2.1.1.365 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNase_E_G | 0.71 | 63.0 | 4.95e-01 | 100.0% | 91.6% |
| 3166329 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.70 | 55.0 | 4.62e-01 | 83.6% | 76.7% |
| 3417056 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 58.0 | 5.68e-01 | 97.3% | 85.0% |
| 4962106 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.70 | 60.0 | 5.01e-01 | 95.9% | 98.4% |
| 5071570 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 59.0 | 5.75e-01 | 98.6% | 86.3% |
| 4505786 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.68 | 53.0 | 4.46e-01 | 83.6% | 77.2% |
| 4282601 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.68 | 53.0 | 4.67e-01 | 100.0% | 56.4% |
| 3887538 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.67 | 59.0 | 4.79e-01 | 100.0% | 55.6% |
| 4385597 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.67 | 58.0 | 5.49e-01 | 97.3% | 81.1% |
| 4236900 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.67 | 52.0 | 4.32e-01 | 83.6% | 74.4% |
| 4067858 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 56.0 | 5.76e-01 | 97.3% | 98.6% |
| 4953898 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.67 | 59.0 | 4.93e-01 | 98.6% | 100.0% |
| 1273132 | 2.2.1.1 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin | 0.67 | 59.0 | 5.60e-01 | 100.0% | 86.0% |
| 3789879 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 58.0 | 5.18e-01 | 98.6% | 78.1% |
| 4581970 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.66 | 58.0 | 4.76e-01 | 98.6% | 96.2% |
| 405 | 2.2.1.6 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB | 0.66 | 57.0 | 5.33e-01 | 100.0% | 81.3% |
| 4289166 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 55.0 | 5.53e-01 | 97.3% | 94.7% |
| 4994226 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.65 | 56.0 | 4.68e-01 | 95.9% | 98.4% |
| 4265586 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.64 | 54.0 | 4.58e-01 | 94.5% | 99.2% |
| 4208811 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 55.0 | 5.27e-01 | 97.3% | 87.1% |
| 4630148 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.64 | 55.0 | 4.62e-01 | 95.9% | 98.4% |
| 4180663 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.64 | 55.0 | 4.59e-01 | 95.9% | 98.4% |
| 5044090 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 39.0 | 3.06e-01 | 84.9% | 46.9% |
D3
high
residues 245-394
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.72 | 51.0 | 5.63e-01 | 72.0% | 99.2% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.71 | 48.0 | 5.38e-01 | 71.3% | 86.6% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 53.0 | 5.40e-01 | 76.0% | 90.2% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.71 | 51.0 | 5.41e-01 | 72.7% | 92.4% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.71 | 49.0 | 5.44e-01 | 70.0% | 100.0% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 51.0 | 5.51e-01 | 74.0% | 100.0% |
| 7xrxB01 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.68 | 50.0 | 3.70e-01 | 76.0% | 56.2% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.68 | 49.0 | 5.33e-01 | 74.0% | 96.8% |
| 4m7cB00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.66 | 47.0 | 4.25e-01 | 72.0% | 85.4% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.66 | 48.0 | 4.78e-01 | 74.7% | 93.6% |
| 2l81A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.65 | 47.0 | 4.47e-01 | 74.0% | 82.4% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.64 | 45.0 | 4.98e-01 | 72.0% | 94.9% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 38.0 | 3.63e-01 | 95.3% | 52.5% |
| 1zylA03 | 1.20.1270.170 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 40.0 | 4.74e-01 | 86.7% | 100.0% |
| 1iqpA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 37.0 | 4.40e-01 | 82.0% | 97.9% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 37.0 | 3.79e-01 | 94.7% | 63.8% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.57 | 44.0 | 4.41e-01 | 82.7% | 78.7% |
| 7xv3R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 42.0 | 3.49e-01 | 78.7% | 50.2% |
| 4cbeA00 | 1.20.120.1640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 49.0 | 4.41e-01 | 98.0% | 88.0% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.55 | 37.0 | 4.20e-01 | 87.3% | 91.1% |
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.52 | 29.0 | 3.77e-01 | 81.3% | 96.5% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 3.71e-01 | 83.3% | 83.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253933 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.73 | 50.0 | 5.49e-01 | 70.0% | 98.4% |
| 3253937 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.73 | 51.0 | 5.61e-01 | 70.7% | 98.3% |
| 3616117 | 601.1.1.25 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › GIT1_C | 0.72 | 50.0 | 5.53e-01 | 70.0% | 90.0% |
| 167831 | 601.16.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › GIT1_C | 0.71 | 51.0 | 5.41e-01 | 72.7% | 92.4% |
| 3390472 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.70 | 50.0 | 4.84e-01 | 72.0% | 69.7% |
| 3395652 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.70 | 49.0 | 5.56e-01 | 72.0% | 98.3% |
| 4184794 | 601.1.1.7 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Talin_IBS2B | 0.70 | 48.0 | 4.89e-01 | 70.0% | 77.3% |
| 3940161 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.70 | 52.0 | 4.92e-01 | 76.7% | 76.0% |
| 3975382 | 601.13.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS › FliS | 0.70 | 50.0 | 5.31e-01 | 75.3% | 82.2% |
| 3463158 | 601.18.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ | 0.69 | 48.0 | 5.33e-01 | 70.7% | 94.1% |
| 54380 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.69 | 49.0 | 5.39e-01 | 72.0% | 100.0% |
| 3275304 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.69 | 50.0 | 5.44e-01 | 75.3% | 90.4% |
| 4958325 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.69 | 48.0 | 4.68e-01 | 71.3% | 83.6% |
| 5038395 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.68 | 50.0 | 4.97e-01 | 76.0% | 82.6% |
| 4018342 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.68 | 44.0 | 5.08e-01 | 82.7% | 90.0% |
| 3731685 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 50.0 | 4.69e-01 | 77.3% | 92.4% |
| 3918432 | 601.1.1.94 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PF27561 | 0.67 | 47.0 | 4.47e-01 | 72.0% | 99.4% |
| 3973510 | 601.4.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › HBM | 0.67 | 49.0 | 5.26e-01 | 76.0% | 93.1% |
| 3804806 | 192.29.1.34 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF677 | 0.65 | 47.0 | 5.12e-01 | 76.0% | 89.6% |
| 3172350 | 4177.1.1.7 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 | 0.62 | 43.0 | 3.85e-01 | 71.3% | 81.0% |
| 4970819 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.61 | 54.0 | 4.72e-01 | 97.3% | 76.4% |
| 4976786 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.61 | 54.0 | 4.87e-01 | 97.3% | 78.9% |
| 4957953 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.60 | 53.0 | 4.67e-01 | 98.7% | 79.8% |
| 3553101 | 601.1.2.6 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B | 0.56 | 49.0 | 4.82e-01 | 96.0% | 97.5% |
| 3167157 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 35.0 | 3.53e-01 | 92.7% | 61.9% |
| 3574287 | 5001.1.1.121 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › TRAM_LAG1_CLN8 | 0.54 | 47.0 | 3.87e-01 | 97.3% | 62.1% |
| 3585044 | 601.1.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › VBS | 0.53 | 47.0 | 4.67e-01 | 96.7% | 99.4% |