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IMGVR_UViG_2918192969_000001-2918192969-2918194563

Arc-Vir

IMGVR_UViG_2918192969_000001-2918192969-2918194563

Identity

Kingdom:
archaea

Quality

90.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-79
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10802.15 best DUF2540 75.2 4.70e-21 93.6% 92.0%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2efvA00 3.30.70.3260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF10802, DUF2540 0.93 86.0 8.47e-01 97.4% 92.7%
2dofA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.57 38.0 3.71e-01 79.5% 63.5%
8e7cA02 1.10.1840.10 Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 0.56 43.0 4.07e-01 87.2% 80.6%
2q6fB03 1.10.1840.10 Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 0.55 44.0 4.14e-01 91.0% 73.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5016567 101.1.11.17 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540 0.94 89.0 8.83e-01 98.7% 96.2%
2871 101.1.11.17 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540 0.93 86.0 8.47e-01 97.4% 92.7%
5016958 101.1.11.17 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540 0.92 86.0 8.55e-01 98.7% 96.2%
4628855 524.1.1.0 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.54 42.0 3.24e-01 85.9% 78.9%
5014495 3745.1.1.1 ↗ alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.53 38.0 2.64e-01 78.2% 78.7%