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IMGVR_UViG_2926421783_000001-2926421783-2926423790

Arc-Vir

IMGVR_UViG_2926421783_000001-2926421783-2926423790

Identity

Kingdom:
archaea

Quality

89.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-74_175-242
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 22.2 1.50e-04 95.7% 43.0%
PF13245.13 AAA_19 50.8 2.80e-13 88.5% 88.8%
PF00580.28 UvrD-helicase 31.2 2.60e-07 55.4% 27.7%
PF00580.28 UvrD-helicase 55.8 8.20e-15 47.5% 21.0%
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.93 90.0 7.71e-01 100.0% 87.6%
1w36B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.91 87.0 6.93e-01 100.0% 92.3%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 77.0 7.00e-01 100.0% 98.3%
3vkwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 74.0 7.43e-01 100.0% 95.1%
3e1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 72.0 6.12e-01 100.0% 62.3%
6jimB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 68.0 6.78e-01 100.0% 87.4%
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 75.0 5.53e-01 100.0% 68.3%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 72.0 6.35e-01 100.0% 80.5%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 74.0 6.29e-01 100.0% 81.0%
1wp9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 73.0 6.36e-01 100.0% 81.9%
1a1vA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 62.0 6.28e-01 82.7% 92.6%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 73.0 6.42e-01 100.0% 80.4%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 72.0 6.35e-01 100.0% 78.6%
5agaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 72.0 6.22e-01 100.0% 83.7%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 71.0 6.15e-01 100.0% 82.0%
6jytA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 68.0 6.39e-01 95.7% 89.8%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 70.0 6.46e-01 100.0% 82.4%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.01e-01 100.0% 78.9%
1w4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 64.0 6.62e-01 100.0% 96.2%
1nktA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 5.40e-01 100.0% 60.1%
1w36D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 69.0 5.74e-01 100.0% 75.6%
2xgjB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.05e-01 100.0% 73.8%
4idhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.01e-01 100.0% 74.0%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 62.0 6.48e-01 100.0% 96.1%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 53.0 5.51e-01 80.6% 78.5%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 69.0 5.88e-01 98.6% 71.4%
1z3iX01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.73 68.0 5.35e-01 100.0% 78.0%
2ykgA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 53.0 5.93e-01 82.7% 95.4%
7clgB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 67.0 6.44e-01 100.0% 88.3%
8kcaB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 68.0 6.27e-01 100.0% 89.5%
7a8rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 66.0 5.84e-01 99.3% 96.5%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 66.0 5.54e-01 100.0% 76.0%
5lb3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 66.0 5.51e-01 100.0% 92.5%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 65.0 6.37e-01 99.3% 98.0%
6yhrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 64.0 5.56e-01 98.6% 95.7%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 66.0 5.91e-01 100.0% 84.9%
1c4oA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 63.0 5.85e-01 97.1% 85.7%
1w36C01 3.40.50.10930 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 64.0 5.48e-01 100.0% 98.6%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 65.0 6.06e-01 100.0% 90.4%
4xjxA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 64.0 5.72e-01 100.0% 82.7%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 6.06e-01 99.3% 85.5%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 62.0 6.07e-01 95.0% 96.6%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 5.96e-01 100.0% 84.5%
3sxuA00 3.40.50.10110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DNA polymerase III subunit chi 0.68 63.0 6.25e-01 100.0% 96.6%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.67 61.0 5.41e-01 100.0% 80.7%
1m6nA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 63.0 5.82e-01 100.0% 96.0%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 51.0 4.95e-01 100.0% 72.2%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 6.10e-01 100.0% 96.4%
2qgzA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 4.92e-01 100.0% 68.4%
2o57A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 55.0 5.20e-01 95.0% 95.2%
1j5xA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 48.0 4.63e-01 95.7% 72.2%
2xblD00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 54.0 4.88e-01 96.4% 75.9%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 48.0 5.10e-01 82.0% 96.6%
3i0zA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 51.0 4.74e-01 96.4% 71.0%
2b2nB01 3.40.50.11180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 51.0 4.41e-01 91.4% 100.0%
4kdcA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 53.0 4.59e-01 95.7% 80.2%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 4.73e-01 95.0% 89.1%
3c3jA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 53.0 4.77e-01 96.4% 70.1%
1ez0A02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.60 54.0 4.92e-01 100.0% 96.2%
1o9gA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.46e-01 95.0% 78.6%
1mkzB00 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.58 39.0 3.66e-01 85.6% 54.4%
2jjmA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 50.0 4.58e-01 95.0% 72.2%
4i1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 4.86e-01 79.1% 99.1%
2qagB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 3.77e-01 83.5% 69.1%
4iscA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.89e-01 96.4% 87.8%
4d02A02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.57 44.0 4.38e-01 80.6% 81.8%
2yogA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 45.0 4.06e-01 84.2% 82.7%
3v4cA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.57 51.0 4.65e-01 100.0% 94.2%
5ereA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 49.0 4.95e-01 93.5% 95.6%
6i8wB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 3.45e-01 84.2% 71.7%
3pffA05 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.56 45.0 4.23e-01 86.3% 71.4%
3ilhA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 42.0 4.35e-01 84.9% 85.7%
3c3kA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 48.0 4.82e-01 95.0% 96.4%
2c4kA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 4.81e-01 93.5% 99.3%
3flhB00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.55 37.0 3.90e-01 82.0% 77.7%
3pdiB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 46.0 4.56e-01 91.4% 94.5%
7kl6A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 4.25e-01 95.7% 85.4%
3dmyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 43.0 4.28e-01 88.5% 98.6%
2pgeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 46.0 3.95e-01 99.3% 91.7%
3lm7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 46.0 3.85e-01 100.0% 91.6%
3bg3A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 46.0 3.56e-01 100.0% 84.4%
1tkkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 44.0 3.71e-01 96.4% 88.1%
1onfA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 37.0 4.01e-01 81.3% 90.7%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962524 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.94 91.0 5.69e-01 100.0% 44.9%
4950774 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.94 91.0 5.60e-01 100.0% 38.6%
3741693 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 90.0 5.47e-01 100.0% 37.6%
4006300 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 90.0 5.55e-01 100.0% 38.5%
3735016 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 90.0 5.47e-01 100.0% 35.2%
4227542 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.93 90.0 5.56e-01 100.0% 39.1%
4266784 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 90.0 5.56e-01 100.0% 39.1%
4173718 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 90.0 5.59e-01 100.0% 41.9%
1108541 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.93 90.0 6.60e-01 100.0% 81.9%
4958436 2008.1.1.217 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase 0.93 90.0 5.14e-01 100.0% 28.0%
3290816 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.93 89.0 5.12e-01 100.0% 27.0%
4449595 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.93 89.0 5.50e-01 100.0% 37.6%
4302341 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.93 89.0 5.20e-01 100.0% 47.2%
3293050 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.93 89.0 6.40e-01 100.0% 78.8%
4422641 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.93 89.0 5.58e-01 100.0% 41.5%
3837994 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.92 89.0 5.56e-01 100.0% 37.9%
5005259 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.92 90.0 5.49e-01 100.0% 40.6%
3186716 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.92 89.0 5.38e-01 100.0% 36.8%
3964423 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.92 89.0 5.54e-01 100.0% 39.4%
4950790 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.92 89.0 5.22e-01 100.0% 46.9%
3385476 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.92 89.0 5.53e-01 100.0% 41.4%
3840082 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.92 89.0 5.49e-01 100.0% 38.1%
4462677 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.92 88.0 5.18e-01 100.0% 45.9%
4964810 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 88.0 5.15e-01 100.0% 42.1%
4615457 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.91 88.0 5.29e-01 100.0% 40.0%
4968904 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.91 88.0 6.42e-01 100.0% 84.3%
4519243 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 88.0 6.72e-01 100.0% 92.5%
3601477 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.91 88.0 5.36e-01 100.0% 37.1%
3980669 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.91 88.0 5.74e-01 100.0% 57.9%
4064402 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.91 88.0 5.20e-01 100.0% 48.8%
4153340 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.91 88.0 5.52e-01 100.0% 44.9%
3950240 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 88.0 6.63e-01 100.0% 93.1%
3945743 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.91 88.0 5.75e-01 100.0% 58.5%
4007755 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.91 88.0 5.52e-01 100.0% 48.1%
5050559 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 87.0 5.97e-01 100.0% 60.2%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.91 87.0 5.44e-01 100.0% 38.3%
5022188 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 88.0 5.64e-01 100.0% 54.7%
3287099 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.91 87.0 5.22e-01 100.0% 38.0%
4400828 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 87.0 6.21e-01 100.0% 84.2%
3703321 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.91 87.0 6.34e-01 100.0% 78.8%
3952349 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.90 87.0 5.19e-01 100.0% 37.2%
4030474 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.90 86.0 5.58e-01 100.0% 53.4%
3174411 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.88 85.0 5.21e-01 100.0% 36.2%
4954685 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.88 85.0 5.40e-01 100.0% 48.0%
4439831 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.83 79.0 6.15e-01 100.0% 92.4%
4165355 2004.1.1.494 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 0.83 78.0 4.93e-01 100.0% 26.3%
3946014 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 78.0 6.68e-01 100.0% 96.7%
3914297 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.82 78.0 5.71e-01 100.0% 60.3%
4950792 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 78.0 6.12e-01 100.0% 93.7%
3735988 2004.1.1.522 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 0.82 78.0 5.47e-01 100.0% 71.0%
4063599 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.82 77.0 7.00e-01 100.0% 95.6%
4098321 2004.1.1.494 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 0.82 78.0 5.30e-01 100.0% 39.3%
3695651 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.82 77.0 5.46e-01 100.0% 68.9%
3924486 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.82 77.0 5.12e-01 100.0% 49.6%
4593468 2004.1.1.494 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 0.81 77.0 4.70e-01 100.0% 35.2%
3684643 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.81 76.0 5.34e-01 100.0% 59.3%
4608944 2004.1.1.492 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 0.81 77.0 4.69e-01 100.0% 36.1%
3788919 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.81 77.0 5.55e-01 100.0% 70.9%
4370284 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.81 77.0 5.93e-01 100.0% 94.6%
4257805 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.81 77.0 4.72e-01 100.0% 38.2%
223951 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.81 74.0 6.83e-01 100.0% 77.6%
4182689 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.80 71.0 6.01e-01 100.0% 60.0%
4303160 2004.1.1.226 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N 0.80 76.0 5.78e-01 100.0% 90.2%
4390173 2004.1.1.492 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 0.80 76.0 4.63e-01 100.0% 35.9%
3936662 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 75.0 5.41e-01 100.0% 71.1%
3240265 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 75.0 5.62e-01 100.0% 68.3%
3287999 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.79 74.0 5.82e-01 100.0% 71.5%
4046976 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.79 74.0 5.93e-01 100.0% 73.7%
3163821 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.77 72.0 5.80e-01 100.0% 74.1%
5025445 2004.1.1.239 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase 0.77 72.0 6.14e-01 100.0% 65.6%
3947000 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.76 72.0 7.02e-01 100.0% 93.3%
1167709 2004.1.1.193 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 0.76 70.0 6.44e-01 100.0% 81.5%
3591208 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 70.0 6.05e-01 100.0% 87.6%
3980670 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 70.0 4.39e-01 100.0% 20.8%
4406156 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.75 70.0 5.53e-01 100.0% 52.1%
3595556 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 70.0 6.00e-01 100.0% 85.2%
5001121 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.74 69.0 5.59e-01 100.0% 86.4%
4164708 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.73 69.0 5.89e-01 100.0% 74.8%
4527075 2004.1.1.28 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK 0.72 66.0 6.58e-01 100.0% 95.7%
None 0.72 68.0 5.84e-01 100.0% 85.4%
5069140 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 66.0 6.01e-01 99.3% 92.2%
4991830 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 65.0 5.74e-01 100.0% 69.9%
4341314 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.69 49.0 5.36e-01 98.6% 88.7%
3316882 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 45.0 4.78e-01 100.0% 75.2%
4814344 2004.1.1.134 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Podovirus_Gp16 0.66 59.0 5.17e-01 100.0% 80.3%
3955026 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.65 61.0 5.92e-01 100.0% 89.7%
4201038 2004.1.1.795 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27377 0.63 52.0 5.24e-01 100.0% 85.7%
4961851 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.63 58.0 5.36e-01 100.0% 78.3%
4403895 2004.1.1.795 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27377 0.62 51.0 4.42e-01 99.3% 58.0%
9676 2004.1.1.108 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SulA 0.61 48.0 5.10e-01 82.0% 96.6%
5075459 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.61 45.0 4.53e-01 84.2% 75.7%
5037696 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.60 55.0 4.87e-01 98.6% 68.5%
4159564 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 54.0 4.69e-01 100.0% 65.6%
3251898 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.52 39.0 4.21e-01 85.6% 95.7%
D2 high residues 80-174
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 49.0 5.40e-01 88.4% 94.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 40.0 4.28e-01 96.8% 77.5%
1y88A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 34.0 4.12e-01 88.4% 100.0%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.54 34.0 3.63e-01 71.6% 72.0%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.39e-01 97.9% 92.9%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.53 39.0 3.57e-01 97.9% 57.3%
2pjqA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.52 34.0 3.49e-01 82.1% 69.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385875 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 56.0 4.26e-01 100.0% 38.6%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.69 44.0 5.22e-01 82.1% 95.4%
3264680 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 41.0 4.36e-01 83.2% 75.0%
3475184 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.64 40.0 4.70e-01 83.2% 100.0%
4881420 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.63 55.0 3.74e-01 100.0% 27.2%
4466704 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.63 44.0 4.34e-01 98.9% 68.0%
3544446 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.63 40.0 4.63e-01 82.1% 100.0%
3629800 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.62 39.0 4.58e-01 83.2% 100.0%
3218213 101.26.1.1 alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N 0.61 38.0 4.52e-01 82.1% 100.0%
3239718 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 35.0 3.96e-01 72.6% 80.0%
5040994 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.64e-01 88.4% 94.7%
4247735 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.58 53.0 3.07e-01 100.0% 12.2%
4441096 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 30.0 3.48e-01 93.7% 88.3%
3342850 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.50 37.0 4.09e-01 81.1% 100.0%
D3 high residues 251-326_431-489
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13361.13 best UvrD_C 40.4 3.70e-10 43.7% 16.1%
PF13538.13 UvrD_C_2 33.9 3.30e-08 42.2% 96.2%
CATH (69)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pjrA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.87 83.0 7.14e-01 100.0% 81.0%
6jimB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 66.0 6.71e-01 100.0% 83.5%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 77.0 6.07e-01 100.0% 72.3%
5eanA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 64.0 5.42e-01 84.4% 82.1%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 71.0 7.23e-01 100.0% 98.5%
3vkwA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 63.0 6.13e-01 100.0% 77.7%
2xzlA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 72.0 6.09e-01 100.0% 79.7%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 72.0 6.74e-01 100.0% 86.2%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 71.0 6.08e-01 100.0% 80.2%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 71.0 6.66e-01 100.0% 83.9%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 50.0 5.08e-01 80.0% 69.9%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 56.0 4.94e-01 80.0% 72.2%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 67.0 6.45e-01 100.0% 87.9%
1w36D03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 69.0 6.25e-01 100.0% 93.1%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 56.0 4.89e-01 82.2% 72.0%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 58.0 4.09e-01 87.4% 43.6%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 55.0 4.98e-01 81.5% 73.3%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 54.0 4.85e-01 80.7% 68.8%
6b4kB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 56.0 5.15e-01 83.7% 79.4%
4a8jF00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 54.0 4.38e-01 83.0% 59.5%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 54.0 3.81e-01 84.4% 43.2%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 52.0 5.04e-01 80.0% 85.4%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 53.0 4.54e-01 81.5% 65.4%
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 52.0 4.82e-01 81.5% 79.5%
3sxuA00 3.40.50.10110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DNA polymerase III subunit chi 0.65 50.0 4.90e-01 80.0% 80.1%
3jcmN01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 4.86e-01 97.0% 92.2%
2xgjB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 51.0 4.33e-01 83.0% 90.3%
3en0C00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.64 49.0 3.95e-01 80.7% 46.5%
2ocaA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 50.0 4.33e-01 83.0% 77.4%
1w36C01 3.40.50.10930 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 48.0 4.09e-01 80.0% 60.4%
4ljyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 5.06e-01 97.8% 76.4%
6xm1C01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.62 42.0 4.35e-01 74.8% 71.5%
3dnfA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.62 43.0 4.90e-01 76.3% 97.0%
5oesA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.62 44.0 4.60e-01 73.3% 98.4%
2xheA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.61 42.0 4.33e-01 74.8% 73.4%
1epuA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.61 43.0 4.39e-01 74.8% 75.0%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 47.0 3.91e-01 80.0% 61.1%
7cluA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 44.0 3.73e-01 75.6% 76.8%
3gpgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.60 46.0 4.40e-01 82.2% 89.5%
4crwB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 55.0 5.18e-01 97.8% 83.5%
1y8cA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 42.0 3.86e-01 75.6% 67.2%
4qgsA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 44.0 4.12e-01 79.3% 76.3%
2pjdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 43.0 3.97e-01 77.8% 66.1%
1mqsA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.57 42.0 4.16e-01 74.8% 100.0%
5dzsB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 4.21e-01 75.6% 80.3%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 53.0 5.11e-01 100.0% 90.6%
3om0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 41.0 3.91e-01 75.6% 63.7%
2yxdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 3.74e-01 75.6% 63.7%
1f3lA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 4.04e-01 74.8% 85.3%
4dcmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 3.81e-01 76.3% 64.9%
2zpaA01 3.40.50.11040 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 40.0 3.66e-01 73.3% 78.8%
3lfjB00 3.40.35.10 Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component 0.55 41.0 3.84e-01 80.0% 62.7%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 3.71e-01 75.6% 61.9%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 40.0 3.89e-01 76.3% 71.8%
4z2yA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 3.45e-01 75.6% 54.1%
1m3sB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 40.0 3.65e-01 76.3% 56.8%
2jfqA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 40.0 4.27e-01 74.8% 100.0%
4amuA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.55 39.0 3.70e-01 74.8% 65.5%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 3.58e-01 76.3% 59.6%
1fztA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 42.0 3.63e-01 81.5% 89.6%
1wznA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.70e-01 81.5% 56.9%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 39.0 3.91e-01 75.6% 75.9%
1zq9A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 3.60e-01 76.3% 88.3%
5bxyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 38.0 3.67e-01 76.3% 76.6%
4akgA15 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 36.0 3.72e-01 81.5% 75.8%
2akoA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.52 39.0 3.32e-01 81.5% 80.5%
3hs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 3.77e-01 75.6% 79.0%
2a3nA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.50 37.0 3.58e-01 94.1% 65.4%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 42.0 3.76e-01 92.6% 93.0%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962524 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.90 86.0 5.38e-01 100.0% 46.7%
4266784 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.88 84.0 5.20e-01 100.0% 51.0%
3958289 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 84.0 5.68e-01 100.0% 81.2%
3284594 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.88 84.0 5.11e-01 100.0% 50.4%
3964423 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.17e-01 100.0% 51.2%
3385476 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.20e-01 100.0% 50.6%
3741693 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.07e-01 100.0% 47.1%
3837994 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.18e-01 100.0% 50.9%
3186716 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.01e-01 100.0% 46.9%
3735016 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.87 83.0 5.04e-01 100.0% 50.0%
4030474 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.86 82.0 5.31e-01 100.0% 34.5%
4600616 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.86 81.0 6.96e-01 100.0% 78.5%
9698 2004.1.1.508 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 0.85 68.0 4.91e-01 81.5% 91.2%
4950774 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.85 81.0 5.01e-01 100.0% 48.4%
3698565 2004.1.1.508 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 0.83 66.0 4.50e-01 82.2% 90.0%
4677652 2004.1.1.1017 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12, UvrD_C 0.83 78.0 5.92e-01 100.0% 67.6%
3601477 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.81 77.0 4.73e-01 100.0% 51.1%
3589167 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.81 74.0 7.37e-01 100.0% 94.3%
4950793 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.79 62.0 3.80e-01 80.7% 43.7%
4033303 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 73.0 6.20e-01 100.0% 78.1%
3726613 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 74.0 5.85e-01 100.0% 83.6%
3334481 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 62.0 5.44e-01 83.0% 76.3%
3177411 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 73.0 5.97e-01 100.0% 74.3%
4943903 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 73.0 4.43e-01 100.0% 24.1%
3955473 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 72.0 6.31e-01 100.0% 85.1%
5080800 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 72.0 6.14e-01 100.0% 95.7%
3633429 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 73.0 5.90e-01 100.0% 71.1%
4498286 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 72.0 6.09e-01 100.0% 78.6%
4336608 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.76 71.0 4.58e-01 100.0% 28.2%
4951118 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 72.0 5.71e-01 100.0% 74.4%
3175300 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.76 72.0 4.62e-01 100.0% 36.4%
5024276 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 72.0 5.89e-01 100.0% 77.8%
4028314 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 72.0 5.81e-01 100.0% 81.6%
3218209 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 72.0 5.40e-01 100.0% 64.3%
3189268 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 62.0 4.91e-01 84.4% 73.6%
3414279 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.89e-01 100.0% 79.6%
3927962 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.84e-01 100.0% 87.4%
None 0.76 71.0 6.24e-01 100.0% 85.8%
3878703 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.81e-01 100.0% 79.6%
3428412 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.94e-01 100.0% 80.0%
3639517 2004.1.1.768 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 0.76 71.0 4.40e-01 100.0% 27.2%
3265097 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.54e-01 100.0% 67.0%
3194173 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.83e-01 100.0% 73.5%
3309083 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.78e-01 100.0% 73.2%
3397089 2004.1.1.920 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_11, AAA_12 0.75 71.0 4.50e-01 100.0% 26.8%
3520006 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.96e-01 100.0% 84.2%
3475074 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.69e-01 100.0% 80.8%
3838509 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 6.11e-01 100.0% 82.0%
3743179 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 4.24e-01 100.0% 18.4%
3605331 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.96e-01 100.0% 77.6%
3535364 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.99e-01 100.0% 77.1%
3825238 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.76e-01 100.0% 72.3%
3682625 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 4.57e-01 100.0% 30.9%
3408803 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 6.16e-01 100.0% 80.0%
3913640 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.79e-01 100.0% 72.6%
3697444 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 71.0 5.67e-01 100.0% 64.5%
3266728 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.96e-01 100.0% 79.0%
3784726 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.77e-01 100.0% 79.6%
3639642 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.68e-01 100.0% 66.3%
3796494 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.59e-01 100.0% 62.8%
3246401 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.95e-01 100.0% 86.7%
3786529 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 70.0 5.78e-01 100.0% 80.0%
3253816 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 69.0 5.63e-01 100.0% 82.5%
4994530 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 70.0 4.67e-01 100.0% 34.2%
3731003 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 5.76e-01 100.0% 76.4%
3578404 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 70.0 5.87e-01 100.0% 84.7%
4331804 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 70.0 6.08e-01 100.0% 77.9%
3924506 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 70.0 6.00e-01 100.0% 81.0%
3247954 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 69.0 5.92e-01 100.0% 79.0%
3265034 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 5.72e-01 100.0% 72.4%
3433486 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 5.76e-01 100.0% 78.2%
3240292 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 5.85e-01 100.0% 79.0%
4943170 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 6.01e-01 100.0% 84.6%
3432662 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 68.0 5.85e-01 100.0% 78.5%
3930896 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 5.99e-01 100.0% 83.1%
3222867 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 69.0 5.77e-01 100.0% 74.0%
3936669 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 68.0 5.86e-01 100.0% 79.0%
3439817 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.72 67.0 5.74e-01 100.0% 75.2%
3965772 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.72 68.0 6.39e-01 100.0% 91.3%
3603695 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.70 67.0 5.92e-01 100.0% 90.3%
3208633 2004.1.1.768 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 0.69 60.0 3.68e-01 92.6% 57.7%
4029878 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.68 57.0 3.95e-01 88.9% 45.0%
4622922 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.63 59.0 4.81e-01 100.0% 82.1%
1102197 101.1.2.163 alpha arrays › HTH › HTH › winged helix domain › PMT2_N 0.63 46.0 4.28e-01 75.6% 87.7%
3491169 7585.1.1.1 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.63 43.0 4.38e-01 75.6% 70.8%
4890002 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 46.0 4.34e-01 74.8% 73.8%
5071682 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 42.0 4.17e-01 83.0% 65.0%
3592397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 57.0 4.33e-01 97.8% 48.8%
3482758 7585.1.1.0 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins 0.62 43.0 4.37e-01 74.8% 72.3%
3249866 7585.1.1.1 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.60 41.0 4.09e-01 74.8% 66.4%
3689925 2007.1.7.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH 0.59 45.0 4.12e-01 80.7% 68.3%
4342029 2003.1.5.145 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RLMG_N 0.58 43.0 3.81e-01 76.3% 63.1%
4368318 2003.1.5.145 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RLMG_N 0.58 42.0 3.83e-01 76.3% 63.7%
None 0.58 42.0 3.82e-01 77.0% 60.5%
4964803 2004.1.1.1220 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF26510 0.57 53.0 4.26e-01 100.0% 92.2%
3573556 2003.1.5.145 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RLMG_N 0.56 41.0 3.50e-01 76.3% 50.2%
4422320 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.53 39.0 3.31e-01 75.6% 51.8%
D4 high residues 334-421
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d5lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 27.0 3.67e-01 98.9% 100.0%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.54e-01 84.1% 78.6%
2r6fA02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.52 42.0 3.62e-01 94.3% 91.0%
3cexA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 41.0 3.37e-01 88.6% 63.5%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 44.0 3.75e-01 98.9% 77.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4807989 4982.2.1.0 alpha arrays › KaiA/RbsU domain-like › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mitochondrial 54S ribosomal protein L8 C-terminal domain 0.63 38.0 4.24e-01 100.0% 78.8%
3781253 4982.2.1.0 alpha arrays › KaiA/RbsU domain-like › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mitochondrial 54S ribosomal protein L8 C-terminal domain 0.62 37.0 3.63e-01 100.0% 54.7%
5055105 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 4.37e-01 97.7% 84.3%
5039995 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 2.98e-01 100.0% 22.1%
3867577 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 36.0 2.92e-01 70.5% 84.0%
3974380 304.154.1.0 a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain 0.52 37.0 3.24e-01 97.7% 48.9%
4956867 7064.1.1.0 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 0.52 44.0 3.90e-01 100.0% 87.9%
167917 620.1.1.6 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.52 41.0 3.37e-01 88.6% 63.5%