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IMGVR_UViG_3300000032_000052-3300000032-Draft_000870015
Arc-VirIMGVR_UViG_3300000032_000052-3300000032-Draft_000870015
Identity
- Kingdom:
- archaea
Quality
78.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-90
Domain cluster:
rep: IMGVR_UViG_3300002837_000120-3300002837-bg3kmer60_100313610__D2-82
D2
high
residues 97-133_136-142_144-153_155-161_163-164_166-175_177-180_182-197
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.63 | 48.0 | 4.83e-01 | 82.8% | 84.4% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.63 | 42.0 | 4.35e-01 | 76.3% | 73.0% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.60 | 46.0 | 4.79e-01 | 81.7% | 94.2% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.60 | 46.0 | 3.10e-01 | 82.8% | 45.0% |
| 7qu9A01 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.60 | 47.0 | 3.10e-01 | 88.2% | 38.9% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 42.0 | 4.32e-01 | 77.4% | 85.4% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.58 | 48.0 | 3.29e-01 | 91.4% | 65.9% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.58 | 48.0 | 3.11e-01 | 91.4% | 51.4% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 44.0 | 3.50e-01 | 83.9% | 78.8% |
| 1tuoA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.56 | 37.0 | 4.21e-01 | 80.6% | 95.4% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.56 | 42.0 | 3.78e-01 | 81.7% | 87.1% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 42.0 | 3.79e-01 | 79.6% | 95.3% |
| 5abxA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.54 | 41.0 | 3.35e-01 | 79.6% | 43.9% |
| 1x31C02 | 3.30.70.1520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase | 0.54 | 40.0 | 4.23e-01 | 81.7% | 91.3% |
| 4l3tA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 44.0 | 3.39e-01 | 91.4% | 38.5% |
| 5ao2B02 | 3.30.70.2760 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 4.17e-01 | 81.7% | 93.3% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 3.92e-01 | 80.6% | 86.3% |
| 2qz8A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.53 | 35.0 | 3.71e-01 | 79.6% | 77.8% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 40.0 | 4.24e-01 | 81.7% | 91.8% |
| 4hkqA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 38.0 | 3.40e-01 | 81.7% | 51.4% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.52 | 38.0 | 2.62e-01 | 81.7% | 63.1% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.30e-01 | 71.0% | 80.0% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.50 | 38.0 | 3.29e-01 | 81.7% | 53.9% |
| 3madA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.76e-01 | 92.5% | 76.3% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3701279 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.66 | 52.0 | 5.17e-01 | 83.9% | 86.3% |
| 3930230 | 331.4.1.5 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK | 0.65 | 49.0 | 4.62e-01 | 81.7% | 93.0% |
| 3917491 | 331.4.1.5 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK | 0.64 | 49.0 | 4.35e-01 | 82.8% | 88.1% |
| 184669 | 331.2.1.2 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF2218 | 0.63 | 48.0 | 4.83e-01 | 82.8% | 84.4% |
| 4958980 | 331.2.1.14 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Fer4_7 | 0.63 | 56.0 | 4.80e-01 | 100.0% | 83.3% |
| 5051705 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.62 | 48.0 | 4.77e-01 | 82.8% | 84.2% |
| 4968206 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.62 | 47.0 | 4.93e-01 | 82.8% | 94.1% |
| 3415773 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 45.0 | 4.62e-01 | 79.6% | 81.1% |
| 3182505 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.61 | 47.0 | 4.68e-01 | 83.9% | 98.0% |
| 3171578 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.61 | 49.0 | 4.69e-01 | 88.2% | 96.4% |
| 3587052 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.60 | 45.0 | 4.51e-01 | 78.5% | 93.7% |
| 4544844 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.60 | 49.0 | 4.73e-01 | 88.2% | 96.2% |
| 3510576 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.60 | 46.0 | 4.84e-01 | 81.7% | 97.5% |
| 4968205 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.60 | 45.0 | 4.65e-01 | 81.7% | 85.6% |
| 3319814 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.60 | 45.0 | 4.25e-01 | 81.7% | 67.3% |
| 3598831 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 45.0 | 4.48e-01 | 82.8% | 80.0% |
| 3403199 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.59 | 45.0 | 4.27e-01 | 81.7% | 70.9% |
| 4959161 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.59 | 44.0 | 4.28e-01 | 81.7% | 84.3% |
| 3739666 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.59 | 47.0 | 4.84e-01 | 88.2% | 96.7% |
| 3503689 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.59 | 45.0 | 4.28e-01 | 82.8% | 87.3% |
| 3710489 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.58 | 45.0 | 4.33e-01 | 82.8% | 76.2% |
| 4021508 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 44.0 | 4.36e-01 | 81.7% | 84.0% |
| 4947558 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 43.0 | 4.44e-01 | 80.6% | 95.6% |
| 5022991 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 43.0 | 4.36e-01 | 81.7% | 81.1% |
| 4635290 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.57 | 45.0 | 2.92e-01 | 83.9% | 34.7% |
| 4985176 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 45.0 | 4.33e-01 | 87.1% | 90.9% |
| 3899939 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.57 | 43.0 | 4.57e-01 | 81.7% | 96.2% |
| 4970447 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.57 | 41.0 | 4.11e-01 | 78.5% | 87.0% |
| 3613199 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.57 | 44.0 | 4.27e-01 | 83.9% | 76.2% |
| 4346967 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.56 | 45.0 | 4.61e-01 | 88.2% | 98.9% |
| 5073587 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 45.0 | 4.48e-01 | 87.1% | 89.5% |
| 4230926 | 304.107.1.2 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › SoxG | 0.55 | 42.0 | 3.40e-01 | 83.9% | 83.8% |
| 3781646 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.54 | 41.0 | 3.09e-01 | 83.9% | 50.0% |
| 4544858 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 41.0 | 2.67e-01 | 82.8% | 35.6% |
| 4296079 | 304.48.1.39 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › MatK_N | 0.53 | 40.0 | 2.80e-01 | 81.7% | 50.9% |
| 3787551 | 223.2.1.17 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SLM4 | 0.51 | 35.0 | 2.96e-01 | 71.0% | 84.2% |
| 4217802 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.50 | 40.0 | 4.03e-01 | 89.2% | 96.8% |