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IMGVR_UViG_3300000082_000010-3300000082-GBSSSed77CDRAFT_0002106
Arc-VirIMGVR_UViG_3300000082_000010-3300000082-GBSSSed77CDRAFT_0002106
Identity
- Kingdom:
- archaea
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-123
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jliA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 35.0 | 3.63e-01 | 77.9% | 59.8% |
| 3vkgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.60 | 49.0 | 4.64e-01 | 88.5% | 96.6% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.59 | 46.0 | 4.30e-01 | 100.0% | 67.8% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 32.0 | 3.27e-01 | 74.6% | 58.1% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.54 | 40.0 | 3.47e-01 | 77.0% | 62.0% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.51 | 31.0 | 3.31e-01 | 85.2% | 68.3% |
| 4eeiA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 32.0 | 3.56e-01 | 73.8% | 82.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254588 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.59 | 48.0 | 3.36e-01 | 86.1% | 92.6% |
| 4991883 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 44.0 | 4.57e-01 | 96.7% | 88.7% |
| 3595980 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.56 | 34.0 | 3.62e-01 | 82.8% | 68.2% |
| 3491977 | 3343.1.1.1 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal | 0.55 | 49.0 | 3.35e-01 | 99.2% | 78.4% |
| 4033267 | 4317.1.1.1 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 | 0.54 | 21.0 | 2.91e-01 | 73.0% | 68.3% |
| 3945544 | 4317.1.1.1 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 | 0.53 | 20.0 | 2.81e-01 | 72.1% | 68.3% |
| 5011659 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 43.0 | 4.46e-01 | 96.7% | 91.3% |
| 3910066 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 31.0 | 3.72e-01 | 79.5% | 88.7% |
| 3224950 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 29.0 | 3.19e-01 | 98.4% | 63.8% |
| 3312398 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.51 | 44.0 | 3.95e-01 | 95.1% | 68.5% |
| 2526901 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 43.0 | 3.74e-01 | 95.1% | 87.4% |