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IMGVR_UViG_3300000116_008667-3300000116-DelMOSpr2010_100132104
Arc-VirIMGVR_UViG_3300000116_008667-3300000116-DelMOSpr2010_100132104
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-277
Domain cluster:
rep: MN018232.1__QDH50545.1__X__00079__D38-80_200-266_280-321
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 39.0 | 4.26e-01 | 91.8% | 64.2% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 32.0 | 3.69e-01 | 74.9% | 61.4% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.64 | 40.0 | 4.86e-01 | 79.7% | 92.9% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 27.0 | 3.05e-01 | 87.9% | 51.9% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 42.0 | 4.05e-01 | 93.2% | 62.7% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 44.0 | 4.05e-01 | 93.2% | 58.1% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 37.0 | 4.40e-01 | 75.8% | 90.1% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.59 | 33.0 | 3.72e-01 | 87.9% | 68.9% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.58 | 43.0 | 4.43e-01 | 87.9% | 79.3% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.57 | 31.0 | 3.69e-01 | 81.6% | 74.7% |
| 4mhlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 33.0 | 3.67e-01 | 74.9% | 70.8% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.56 | 40.0 | 4.21e-01 | 82.1% | 79.4% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 41.0 | 4.65e-01 | 80.7% | 100.0% |
| 4n1yB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 29.0 | 2.87e-01 | 97.1% | 46.3% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 30.0 | 3.41e-01 | 75.8% | 76.7% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 40.0 | 4.33e-01 | 82.1% | 97.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704169 | 3285.1.1.0 ↗ | alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain | 0.68 | 43.0 | 4.12e-01 | 96.6% | 54.9% |
| 3406963 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.66 | 35.0 | 3.07e-01 | 91.8% | 34.0% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 32.0 | 4.24e-01 | 90.8% | 91.3% |
| None | — | 0.61 | 39.0 | 3.36e-01 | 91.8% | 42.3% | |
| 3907547 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.60 | 34.0 | 2.97e-01 | 88.9% | 36.3% |
| 3180975 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.60 | 38.0 | 3.95e-01 | 90.8% | 67.9% |
| 5064257 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.57 | 40.0 | 4.06e-01 | 81.6% | 70.7% |
| 4009677 | 5086.1.1.220 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › phage_tail_N | 0.57 | 35.0 | 3.66e-01 | 91.3% | 65.9% |
| 3686312 | 633.26.1.6 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain › PF30929 | 0.56 | 46.0 | 4.83e-01 | 87.0% | 98.9% |
| 4946676 | 5082.1.1.6 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › ZT_dimer | 0.55 | 37.0 | 3.79e-01 | 82.1% | 69.3% |
| 3625860 | 601.20.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III | 0.54 | 35.0 | 3.75e-01 | 79.2% | 73.9% |
| 3720596 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.53 | 38.0 | 3.68e-01 | 83.6% | 63.8% |
| 3239667 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 44.0 | 3.00e-01 | 100.0% | 25.9% |