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IMGVR_UViG_3300000146_000054-3300000146-SI54feb11_120mDRAFT_10020931

Arc-Vir

IMGVR_UViG_3300000146_000054-3300000146-SI54feb11_120mDRAFT_10020931

Quality

84.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 55.0 5.60e-01 75.7% 91.0%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.75 52.0 5.29e-01 71.4% 76.5%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 54.0 4.52e-01 77.1% 52.9%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 52.0 4.48e-01 75.7% 54.9%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 53.0 4.72e-01 78.6% 66.7%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 52.0 4.90e-01 78.6% 74.1%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.70 51.0 5.05e-01 77.1% 87.7%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.70 51.0 4.26e-01 78.6% 52.4%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 51.0 4.18e-01 78.6% 50.8%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 49.0 4.93e-01 75.7% 87.5%
5yc9B01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.67 48.0 4.34e-01 75.7% 59.8%
2dzlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.67 40.0 4.15e-01 71.4% 63.6%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.63 43.0 4.37e-01 71.4% 92.6%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 3.87e-01 70.0% 55.3%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 3.78e-01 75.7% 51.7%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.96e-01 71.4% 65.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.89e-01 71.4% 64.3%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.51e-01 70.0% 52.5%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.97e-01 75.7% 73.2%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.45e-01 75.7% 45.6%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.63e-01 70.0% 68.2%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.05e-01 75.7% 78.7%
3bb7A02 3.30.910.30 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Peptidase C10 family 0.55 38.0 3.40e-01 72.9% 97.2%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.01e-01 70.0% 64.5%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.53e-01 70.0% 64.6%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.14e-01 70.0% 51.4%
4n3pA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.53 37.0 2.75e-01 74.3% 42.4%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.53 36.0 3.49e-01 70.0% 65.8%
1dekA02 1.10.238.70 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.53 37.0 3.22e-01 75.7% 89.3%
3slhA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.53 39.0 2.81e-01 78.6% 34.3%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.50 35.0 2.69e-01 74.3% 53.8%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946974 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.84 62.0 5.35e-01 77.1% 64.8%
3840108 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.83 57.0 6.13e-01 71.4% 83.3%
3281621 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 56.0 6.24e-01 70.0% 94.5%
1710781 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 56.0 6.22e-01 70.0% 89.3%
4090636 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 58.0 5.84e-01 72.9% 77.1%
4051681 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 58.0 4.58e-01 72.9% 40.0%
3976170 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.82 57.0 5.73e-01 71.4% 84.3%
3979592 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.82 56.0 4.64e-01 71.4% 46.7%
3385701 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.81 56.0 6.15e-01 71.4% 90.9%
4191032 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 56.0 6.41e-01 72.9% 100.0%
3728047 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.81 55.0 5.67e-01 70.0% 92.3%
4674139 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.80 60.0 4.81e-01 78.6% 77.7%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.80 56.0 6.30e-01 72.9% 100.0%
4176315 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 54.0 6.00e-01 70.0% 90.7%
3718248 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.79 59.0 5.40e-01 78.6% 73.3%
4420911 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 57.0 4.57e-01 75.7% 45.9%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 53.0 6.11e-01 70.0% 98.0%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 54.0 6.01e-01 71.4% 94.5%
4266122 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 55.0 4.93e-01 72.9% 56.8%
4527613 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 53.0 5.09e-01 70.0% 62.0%
3281256 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 54.0 5.14e-01 71.4% 62.5%
5075144 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 53.0 5.23e-01 71.4% 82.7%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 52.0 5.79e-01 70.0% 92.7%
4682727 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 52.0 5.78e-01 70.0% 90.9%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 55.0 4.54e-01 75.7% 48.8%
3954117 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 53.0 4.96e-01 71.4% 58.8%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 53.0 4.76e-01 71.4% 55.8%
4520820 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 55.0 5.45e-01 75.7% 81.3%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 53.0 5.80e-01 71.4% 94.5%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 51.0 5.84e-01 70.0% 100.0%
1827815 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 56.0 5.70e-01 77.1% 91.2%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.76 52.0 5.77e-01 71.4% 92.7%
5073619 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 52.0 5.36e-01 71.4% 96.9%
4548007 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 53.0 4.94e-01 72.9% 60.0%
3838564 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 54.0 5.74e-01 74.3% 91.7%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 54.0 4.40e-01 75.7% 46.2%
3286117 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 54.0 4.44e-01 75.7% 49.6%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 54.0 4.70e-01 75.7% 60.0%
4078914 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.75 54.0 5.18e-01 75.7% 80.0%
3587879 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.75 54.0 4.67e-01 77.1% 57.3%
3958314 101.1.9.66 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.75 50.0 5.55e-01 72.9% 89.1%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.74 56.0 4.64e-01 78.6% 86.1%
3291218 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.74 52.0 4.26e-01 74.3% 46.9%
3511008 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.74 51.0 4.66e-01 71.4% 60.0%
3962562 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 52.0 4.49e-01 72.9% 50.5%
3274594 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.74 66.0 4.74e-01 100.0% 78.5%
5032504 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.74 50.0 5.54e-01 71.4% 90.9%
5075145 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.74 50.0 5.22e-01 71.4% 89.2%
2168161 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 51.0 5.56e-01 72.9% 91.2%
4518241 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 53.0 5.21e-01 77.1% 84.0%
4547937 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 50.0 5.39e-01 71.4% 86.2%
3589467 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 50.0 4.71e-01 71.4% 58.8%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 49.0 5.46e-01 70.0% 92.7%
3966930 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 53.0 4.55e-01 77.1% 58.2%
3979434 101.1.9.101 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.73 51.0 5.61e-01 72.9% 94.5%
3288205 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 52.0 5.03e-01 77.1% 77.5%
3290892 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 52.0 4.58e-01 77.1% 60.0%
3949463 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 52.0 4.45e-01 77.1% 54.8%
3654295 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.70e-01 74.3% 59.1%
4672676 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 52.0 4.21e-01 78.6% 47.9%
3976015 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 51.0 4.96e-01 77.1% 77.5%
4995042 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 53.0 4.96e-01 80.0% 78.8%
3975516 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.70 50.0 4.40e-01 75.7% 60.0%
3739250 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 4.99e-01 74.3% 78.6%
5002797 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 50.0 5.27e-01 75.7% 88.3%
3589675 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.69 46.0 5.24e-01 70.0% 100.0%
3284986 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.69 50.0 4.20e-01 77.1% 50.0%
3951460 101.30.1.3 alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH 0.69 49.0 4.48e-01 74.3% 64.4%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 50.0 4.79e-01 77.1% 80.0%
4311945 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 48.0 3.92e-01 74.3% 42.3%
3290032 101.1.9.126 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_C, Rv2175c_wHTH 0.68 48.0 4.18e-01 74.3% 50.9%
3941757 101.1.9.32 alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.68 47.0 3.89e-01 72.9% 65.4%
3587304 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.67 44.0 4.20e-01 70.0% 56.5%
3278866 221.1.2.17 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 0.59 41.0 4.38e-01 71.4% 91.7%