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IMGVR_UViG_3300000151_000030-3300000151-SI53jan11_200mDRAFT_100091611

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000151_000030-3300000151-SI53jan11_200mDRAFT_100091611 ↗
Kingdom:: archaea

Quality

90.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 276-519

PDB

Domain cluster: rep: IMGVR_UViG_3300005095_000540-3300005095-Ga0072504_10167229__D19-209

D2 medium residues 40-77_144-162

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2jnsA01	1.20.1270.220	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.69	46.0	4.08e-01	98.2%	48.1%
1evsA00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.69	63.0	4.44e-01	100.0%	45.4%
1y6xA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.67	52.0	4.44e-01	82.5%	52.9%
2ce7B03	1.20.58.760	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41	0.64	51.0	3.61e-01	86.0%	87.5%
8d7hD01	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.63	55.0	3.95e-01	100.0%	68.2%
4j8sA00	1.25.40.840	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain	0.61	50.0	3.47e-01	89.5%	61.1%
1gwcA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.60	47.0	3.53e-01	84.2%	57.4%
7zxkC01	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.57	47.0	3.64e-01	100.0%	68.7%
1x9fA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.56	44.0	3.25e-01	86.0%	53.1%
3ibhA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.56	43.0	3.45e-01	84.2%	70.3%
2mabA00	1.10.10.1350	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain	0.54	47.0	3.83e-01	100.0%	88.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4140042	141.1.1.8 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2	0.61	55.0	3.33e-01	98.2%	24.3%
3241816	5050.1.1.2 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2	0.59	47.0	3.10e-01	89.5%	92.7%
4970979	633.21.1.0 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107	0.59	53.0	4.30e-01	100.0%	57.1%
3711844	210.2.1.0 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain	0.56	50.0	3.12e-01	100.0%	26.6%
3419760	150.7.1.3 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › CGLD27-like	0.54	47.0	4.08e-01	96.5%	76.5%
4985569	873.1.1.12 ↗	a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313	0.52	46.0	3.51e-01	100.0%	61.5%

D3 medium residues 78-128

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3btxA00	2.60.120.590	Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like	0.56	44.0	3.10e-01	98.0%	86.3%
1du2A00	1.20.58.250	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA polymerase III-theta	0.55	41.0	3.71e-01	86.3%	69.7%
5xd6B02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.52	43.0	3.03e-01	100.0%	46.8%
5vanA02	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.50	40.0	2.40e-01	90.2%	86.4%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3894011	4106.1.1.1 ↗	few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC	0.64	52.0	3.51e-01	94.1%	40.0%
3517171	604.8.1.3 ↗	alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Gpi1	0.54	44.0	2.97e-01	92.2%	36.2%
3683264	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.54	43.0	3.03e-01	94.1%	75.7%
4021811	2004.1.1.168 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB	0.53	45.0	2.86e-01	100.0%	24.3%
3281567	101.1.2.26 ↗	alpha arrays › HTH › HTH › winged helix domain › HxlR	0.52	35.0	2.66e-01	70.6%	67.2%
3258074	4357.1.1.1 ↗	beta barrels › WWE domain › WWE domain › WWE domain › WWE	0.51	35.0	3.27e-01	90.2%	56.9%
4613954	4271.1.1.0 ↗	alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like	0.51	45.0	3.04e-01	100.0%	50.5%
3195106	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.51	37.0	2.17e-01	88.2%	41.8%
3724437	327.11.2.44 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28723	0.51	32.0	3.16e-01	100.0%	60.0%

D4 medium residues 163-275

PDB

Domain cluster: rep: IMGVR_UViG_3300025458_000219-3300025458-Ga0209559_100246914__D175-255