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IMGVR_UViG_3300000151_000033-3300000151-SI53jan11_200mDRAFT_100098524
Arc-VirIMGVR_UViG_3300000151_000033-3300000151-SI53jan11_200mDRAFT_100098524
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-167
Domain cluster:
rep: sw_7_scaffold_1_prodigal-single.1__X__X__00357__D2-137
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.80 | 33.0 | 5.40e-01 | 75.6% | 100.0% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 30.0 | 4.59e-01 | 72.6% | 91.4% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 32.0 | 4.81e-01 | 75.0% | 100.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 30.0 | 4.45e-01 | 73.2% | 94.4% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.67 | 27.0 | 4.31e-01 | 72.0% | 98.4% |
| 3o4fC01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.66 | 22.0 | 3.93e-01 | 77.4% | 96.1% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.66 | 32.0 | 3.02e-01 | 79.3% | 37.7% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.61 | 22.0 | 3.64e-01 | 72.0% | 91.5% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 33.0 | 4.28e-01 | 86.6% | 95.7% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.58 | 33.0 | 4.28e-01 | 78.0% | 96.8% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 34.0 | 3.59e-01 | 84.1% | 65.6% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 35.0 | 3.88e-01 | 82.9% | 81.8% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.51 | 38.0 | 3.41e-01 | 78.0% | 86.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4377781 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.77 | 39.0 | 5.52e-01 | 78.0% | 100.0% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.68 | 30.0 | 3.92e-01 | 73.2% | 71.6% |
| 2410381 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 31.0 | 4.38e-01 | 74.4% | 92.4% |
| 3624304 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 37.0 | 4.76e-01 | 75.6% | 94.7% |
| 3675120 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 31.0 | 4.24e-01 | 73.8% | 87.1% |
| 4938225 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.57 | 33.0 | 4.01e-01 | 75.0% | 87.6% |
| 4961922 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 33.0 | 4.00e-01 | 76.2% | 86.2% |
| 3713569 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 30.0 | 3.35e-01 | 76.2% | 66.2% |
| 3828614 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.55 | 35.0 | 4.20e-01 | 82.3% | 94.5% |
| 3597347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 31.0 | 3.68e-01 | 76.8% | 78.3% |
| 3390315 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.52 | 26.0 | 3.54e-01 | 71.3% | 100.0% |
| 3687369 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.52 | 29.0 | 3.66e-01 | 75.6% | 90.0% |
| 3993298 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.51 | 26.0 | 3.60e-01 | 70.7% | 100.0% |
| 3819164 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.51 | 37.0 | 3.69e-01 | 82.9% | 71.2% |