←Back to structures

IMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011041

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011041 ↗
Kingdom:: archaea

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65

PDB

Domain cluster: representative

CATH (22)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4aflA00	6.10.140.1740	Special › Helix non-globular › Helix Hairpins ›	0.83	72.0	6.16e-01	100.0%	60.8%
2y39A00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.79	66.0	5.56e-01	93.8%	54.5%
4aifA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.79	52.0	3.92e-01	73.4%	29.9%
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.78	64.0	6.03e-01	96.9%	75.3%
4dciA00	6.10.140.1110	Special › Helix non-globular › Helix Hairpins ›	0.73	66.0	4.94e-01	100.0%	42.9%
2yevA02	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.73	56.0	5.38e-01	98.4%	73.0%
1wpaA01	6.10.140.340	Special › Helix non-globular › Helix Hairpins ›	0.72	62.0	5.44e-01	100.0%	71.7%
1wleA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.71	61.0	5.10e-01	98.4%	70.2%
2js5A00	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.70	51.0	4.99e-01	79.7%	71.8%
7xv3R01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.69	58.0	3.87e-01	96.9%	22.9%
1gaxA05	1.10.287.380	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain	0.68	52.0	5.01e-01	84.4%	72.6%
1vf7A03	1.10.287.470	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.67	49.0	5.03e-01	79.7%	85.0%
3teqB00	1.10.287.3550	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.67	57.0	5.02e-01	100.0%	74.3%
6nsjA00	1.25.40.600	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › AmiS/UreI transporter	0.67	51.0	3.67e-01	82.8%	39.6%
3lssA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.66	55.0	4.65e-01	100.0%	54.5%
3pe0A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	47.0	4.09e-01	78.1%	48.5%
3mq1A01	1.20.58.970	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	48.0	4.26e-01	93.8%	54.3%
1ku9A02	1.10.287.450	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.65	48.0	4.81e-01	85.9%	81.2%
1u97A00	1.10.287.1130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › CytochromE C oxidase copper chaperone	0.64	40.0	4.00e-01	70.3%	59.4%
3g67A00	1.10.287.950	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein	0.62	53.0	3.79e-01	100.0%	31.0%
1hwyA01	1.10.287.140	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.53	37.0	4.00e-01	75.0%	96.1%
2o57A01	1.10.287.840	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mycolic acid cyclopropane synthase domain like	0.52	38.0	3.35e-01	82.8%	88.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4089827	192.1.1.34 ↗	alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF444	0.82	70.0	6.63e-01	100.0%	80.0%
3991595	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.79	57.0	4.98e-01	78.1%	51.6%
3475201	3652.1.1.2 ↗	alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › STAR_dimer	0.78	60.0	6.18e-01	89.1%	88.3%
3505608	192.29.1.1 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom	0.74	62.0	5.93e-01	95.3%	78.7%
5060491	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.72	63.0	5.20e-01	100.0%	53.3%
3646011	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.70	55.0	5.44e-01	95.3%	80.0%
3516160	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.69	52.0	4.17e-01	82.8%	40.8%
4045132	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.69	61.0	5.04e-01	96.9%	68.2%
3184698	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.67	56.0	5.11e-01	100.0%	78.9%
3386594	3291.1.1.197 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MCPsignal	0.63	53.0	4.64e-01	100.0%	61.0%