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IMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011043
Arc-VirIMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011043
Identity
- Kingdom:
- archaea
Quality
94.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-99
Domain cluster:
rep: NC_021559.1__YP_008130120.1__PRAG_00194__00187__D14-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24835.2 best | DUF7717 | 49.3 | 7.50e-13 | 99.0% | 70.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g7pA00 | 1.10.3100.20 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Protein of unknown function DUF269 | 0.63 | 50.0 | 4.41e-01 | 100.0% | 57.2% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.61 | 42.0 | 4.26e-01 | 85.4% | 70.4% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.57 | 49.0 | 4.86e-01 | 99.0% | 92.9% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 39.0 | 4.11e-01 | 100.0% | 86.6% |
| 2xp1A02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 43.0 | 4.59e-01 | 100.0% | 100.0% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.54 | 44.0 | 3.75e-01 | 89.6% | 82.1% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.56e-01 | 95.8% | 93.3% |
| 1trbA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.66e-01 | 95.8% | 92.0% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 37.0 | 2.57e-01 | 74.0% | 36.6% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 3.58e-01 | 91.7% | 76.8% |
| 1ybiA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 41.0 | 3.61e-01 | 87.5% | 97.2% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.50 | 35.0 | 3.90e-01 | 93.8% | 93.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4341158 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.65 | 57.0 | 4.86e-01 | 100.0% | 92.0% |
| 3212280 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 44.0 | 2.95e-01 | 75.0% | 28.6% |
| 4986017 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 40.0 | 4.53e-01 | 99.0% | 90.0% |
| 3700578 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.60 | 36.0 | 4.32e-01 | 99.0% | 95.0% |
| 4154855 | 4205.1.1.1 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › Syd | 0.59 | 50.0 | 4.14e-01 | 95.8% | 100.0% |
| 4946203 | 3794.1.1.7 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › Biotin_lipoyl | 0.58 | 37.0 | 4.03e-01 | 84.4% | 81.3% |
| 5040837 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.58 | 40.0 | 4.43e-01 | 87.5% | 92.0% |
| 2582168 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.58 | 50.0 | 4.23e-01 | 95.8% | 97.5% |
| 3976684 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.57 | 38.0 | 4.04e-01 | 82.3% | 80.0% |
| 4960279 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.57 | 31.0 | 4.01e-01 | 87.5% | 100.0% |
| 2029624 | 1148.1.1.1 ↗ | a+b two layers › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cwp8_D2 | 0.57 | 41.0 | 4.38e-01 | 96.9% | 89.0% |
| 4968392 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.57 | 44.0 | 4.39e-01 | 100.0% | 80.0% |
| 4122018 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.55 | 48.0 | 4.81e-01 | 99.0% | 96.0% |
| 3925754 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 29.0 | 2.60e-01 | 88.5% | 33.3% |
| 3445028 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 41.0 | 4.46e-01 | 93.8% | 97.5% |
| 5028194 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 47.0 | 3.42e-01 | 100.0% | 77.5% |
| 3587732 | 9.6.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Staphostatin › Staphostatin | 0.53 | 42.0 | 4.09e-01 | 86.5% | 97.3% |
| 4204479 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 37.0 | 2.68e-01 | 72.9% | 41.4% |
| 4948218 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.53 | 39.0 | 4.16e-01 | 97.9% | 88.2% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 38.0 | 4.14e-01 | 97.9% | 97.3% |
| 3675660 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.51 | 45.0 | 3.30e-01 | 100.0% | 65.2% |
| 4799073 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.51 | 38.0 | 3.84e-01 | 91.7% | 77.6% |
| 3761570 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.51 | 35.0 | 3.31e-01 | 88.5% | 59.1% |
| 3600844 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 29.0 | 3.27e-01 | 77.1% | 73.3% |
| 3361873 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.50 | 45.0 | 4.39e-01 | 100.0% | 93.3% |
| 3934937 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.50 | 38.0 | 3.11e-01 | 81.2% | 56.3% |