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IMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011044
Arc-VirIMGVR_UViG_3300000151_000037-3300000151-SI53jan11_200mDRAFT_10011044
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-89
Domain cluster:
representative
CATH (83)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 56.0 | 5.60e-01 | 92.9% | 75.3% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 5.93e-01 | 85.9% | 91.4% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.34e-01 | 91.8% | 84.1% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 5.16e-01 | 91.8% | 79.3% |
| 4hlyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 54.0 | 5.00e-01 | 87.1% | 100.0% |
| 3uc4A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 49.0 | 4.96e-01 | 83.5% | 77.6% |
| 2x7gA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 50.0 | 4.98e-01 | 80.0% | 80.7% |
| 4p55B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 54.0 | 5.24e-01 | 89.4% | 100.0% |
| 2onlC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 48.0 | 4.87e-01 | 80.0% | 76.7% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 47.0 | 4.57e-01 | 76.5% | 71.9% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 5.23e-01 | 100.0% | 80.2% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 46.0 | 4.57e-01 | 76.5% | 78.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 55.0 | 4.96e-01 | 100.0% | 69.6% |
| 1u6mA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 44.0 | 3.45e-01 | 89.4% | 33.3% |
| 3qx3B03 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 48.0 | 4.56e-01 | 90.6% | 70.0% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 55.0 | 5.38e-01 | 100.0% | 89.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.62 | 42.0 | 4.29e-01 | 74.1% | 72.0% |
| 2qmwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.62 | 43.0 | 4.24e-01 | 82.4% | 66.7% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 41.0 | 4.24e-01 | 72.9% | 72.0% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.61 | 44.0 | 3.05e-01 | 76.5% | 32.3% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 51.0 | 4.06e-01 | 97.6% | 43.5% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 50.0 | 4.94e-01 | 100.0% | 87.1% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 37.0 | 3.96e-01 | 72.9% | 72.9% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 52.0 | 5.08e-01 | 100.0% | 93.7% |
| 3b82A06 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 3.48e-01 | 75.3% | 45.5% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.60 | 41.0 | 4.20e-01 | 76.5% | 74.1% |
| 2rioA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 42.0 | 4.35e-01 | 75.3% | 81.7% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 42.0 | 4.41e-01 | 75.3% | 87.7% |
| 3dp7A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 42.0 | 3.49e-01 | 87.1% | 40.2% |
| 4h05B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 4.10e-01 | 75.3% | 75.8% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 44.0 | 4.27e-01 | 90.6% | 74.5% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 39.0 | 3.80e-01 | 76.5% | 61.5% |
| 1uv7A00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.58 | 44.0 | 4.56e-01 | 87.1% | 90.8% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 45.0 | 4.10e-01 | 87.1% | 67.8% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 38.0 | 4.44e-01 | 70.6% | 100.0% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 49.0 | 4.34e-01 | 98.8% | 81.2% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 40.0 | 3.90e-01 | 75.3% | 67.0% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 45.0 | 3.99e-01 | 87.1% | 71.2% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.57 | 48.0 | 4.82e-01 | 100.0% | 92.1% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 42.0 | 4.25e-01 | 94.1% | 82.1% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 39.0 | 4.00e-01 | 80.0% | 75.9% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 3.28e-01 | 77.6% | 80.7% |
| 2c47A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 41.0 | 4.34e-01 | 80.0% | 90.4% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 39.0 | 4.09e-01 | 72.9% | 83.8% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 40.0 | 3.88e-01 | 75.3% | 71.6% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 37.0 | 3.85e-01 | 72.9% | 77.3% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 43.0 | 4.43e-01 | 94.1% | 89.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 39.0 | 3.88e-01 | 75.3% | 70.0% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 43.0 | 3.79e-01 | 87.1% | 60.8% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 38.0 | 3.81e-01 | 72.9% | 77.0% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.15e-01 | 90.6% | 75.2% |
| 4o5lL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.02e-01 | 85.9% | 74.0% |
| 1qd1A01 | 3.30.990.10 | Alpha Beta › 2-Layer Sandwich › Formiminotransferase-cyclodeaminase; Chain B, domain 1 › Formiminotransferase, N-terminal subdomain | 0.54 | 38.0 | 3.10e-01 | 74.1% | 60.6% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.68e-01 | 74.1% | 98.0% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.54 | 37.0 | 3.83e-01 | 70.6% | 92.3% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 42.0 | 3.70e-01 | 85.9% | 58.5% |
| 1xkpC00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 43.0 | 3.80e-01 | 88.2% | 65.9% |
| 3h2bB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 3.17e-01 | 82.4% | 97.4% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 4.20e-01 | 98.8% | 90.5% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 47.0 | 4.22e-01 | 100.0% | 70.0% |
| 3mwbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 38.0 | 3.76e-01 | 77.6% | 93.8% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 38.0 | 3.94e-01 | 76.5% | 82.3% |
| 4lecA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 3.36e-01 | 90.6% | 44.6% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 38.0 | 3.19e-01 | 78.8% | 65.9% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.38e-01 | 72.9% | 55.3% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 4.03e-01 | 84.7% | 91.8% |
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.62e-01 | 84.7% | 61.0% |
| 2qmxA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 38.0 | 3.75e-01 | 76.5% | 95.6% |
| 3e3xA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.63e-01 | 75.3% | 95.7% |
| 2qmaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 41.0 | 3.72e-01 | 89.4% | 61.6% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.71e-01 | 87.1% | 63.0% |
| 5xyiY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.78e-01 | 84.7% | 68.6% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.50e-01 | 74.1% | 75.0% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.38e-01 | 75.3% | 55.2% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.65e-01 | 88.2% | 65.1% |
| 1f0xA04 | 3.30.1370.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 | 0.51 | 36.0 | 3.68e-01 | 76.5% | 76.5% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.00e-01 | 89.4% | 31.8% |
| 1ywxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 38.0 | 3.72e-01 | 81.2% | 77.2% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.51 | 39.0 | 3.95e-01 | 88.2% | 100.0% |
| 1j6wA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.50 | 41.0 | 3.40e-01 | 91.8% | 52.2% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.50 | 39.0 | 3.79e-01 | 83.5% | 89.5% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.50 | 39.0 | 3.38e-01 | 85.9% | 55.1% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.50 | 41.0 | 3.40e-01 | 94.1% | 90.9% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002856 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.76 | 57.0 | 5.02e-01 | 92.9% | 55.8% |
| 1884678 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 56.0 | 5.83e-01 | 87.1% | 84.6% |
| 4950811 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.75 | 57.0 | 5.60e-01 | 91.8% | 75.6% |
| 4930172 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.74 | 57.0 | 5.09e-01 | 92.9% | 60.0% |
| 4957330 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.73 | 55.0 | 4.58e-01 | 91.8% | 46.9% |
| 4942107 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.72 | 55.0 | 4.83e-01 | 91.8% | 56.7% |
| 4944753 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 54.0 | 5.45e-01 | 100.0% | 81.2% |
| 4956874 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.70 | 58.0 | 5.58e-01 | 91.8% | 80.0% |
| 4404596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 4.71e-01 | 100.0% | 56.2% |
| 5025804 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.68 | 60.0 | 4.98e-01 | 95.3% | 73.6% |
| 4999546 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.67 | 57.0 | 5.51e-01 | 100.0% | 82.1% |
| 5016171 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 60.0 | 4.80e-01 | 100.0% | 56.9% |
| 4025929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 59.0 | 5.31e-01 | 100.0% | 80.9% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 58.0 | 5.16e-01 | 100.0% | 75.0% |
| 4978533 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.64 | 56.0 | 4.82e-01 | 100.0% | 60.7% |
| 4972754 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.63 | 57.0 | 4.40e-01 | 100.0% | 77.4% |
| 3726634 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.63 | 47.0 | 4.87e-01 | 84.7% | 85.0% |
| 4373762 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.63 | 54.0 | 4.90e-01 | 98.8% | 95.8% |
| 3286725 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 55.0 | 4.23e-01 | 100.0% | 43.8% |
| 4505080 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.63 | 53.0 | 4.81e-01 | 98.8% | 87.2% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.63 | 53.0 | 4.87e-01 | 96.5% | 87.0% |
| 3237026 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.63 | 46.0 | 3.40e-01 | 77.6% | 72.4% |
| 5045752 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 55.0 | 4.18e-01 | 96.5% | 77.9% |
| 4994455 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 55.0 | 5.26e-01 | 100.0% | 83.0% |
| 4389430 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.62 | 52.0 | 4.87e-01 | 96.5% | 87.3% |
| 3218395 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.62 | 45.0 | 3.27e-01 | 77.6% | 75.3% |
| 3518726 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.62 | 50.0 | 3.34e-01 | 88.2% | 91.6% |
| 3599082 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.62 | 50.0 | 4.27e-01 | 90.6% | 74.5% |
| 5076562 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 5.11e-01 | 95.3% | 85.0% |
| 3280466 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 53.0 | 4.08e-01 | 100.0% | 42.6% |
| 3971872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.61 | 48.0 | 4.33e-01 | 87.1% | 63.4% |
| 4934117 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 50.0 | 5.05e-01 | 98.8% | 94.1% |
| 4929803 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.61 | 55.0 | 4.25e-01 | 98.8% | 77.7% |
| 5009651 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.61 | 53.0 | 4.37e-01 | 100.0% | 80.6% |
| 3659065 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.61 | 47.0 | 4.55e-01 | 85.9% | 77.0% |
| 3592353 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.60 | 43.0 | 4.12e-01 | 75.3% | 65.0% |
| 4927073 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.60 | 55.0 | 4.29e-01 | 98.8% | 82.3% |
| 3672141 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.60 | 39.0 | 4.24e-01 | 74.1% | 81.4% |
| 1211839 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 52.0 | 5.04e-01 | 100.0% | 93.8% |
| 5075416 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 51.0 | 4.78e-01 | 100.0% | 91.8% |
| 5049353 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 52.0 | 4.64e-01 | 100.0% | 77.6% |
| 4931494 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.59 | 52.0 | 5.07e-01 | 100.0% | 86.3% |
| 3683636 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.59 | 42.0 | 4.39e-01 | 89.4% | 84.4% |
| 5062023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 52.0 | 4.72e-01 | 100.0% | 72.2% |
| 3958644 | 256.1.1.2 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF5703 | 0.59 | 41.0 | 4.48e-01 | 72.9% | 100.0% |
| 3165990 | 310.3.1.22 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 | 0.58 | 46.0 | 4.26e-01 | 88.2% | 67.8% |
| 4358940 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.58 | 39.0 | 3.95e-01 | 75.3% | 69.4% |
| 3382396 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 44.0 | 4.44e-01 | 90.6% | 83.5% |
| 4927944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 53.0 | 5.00e-01 | 100.0% | 85.0% |
| 3739949 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.58 | 43.0 | 4.34e-01 | 85.9% | 81.2% |
| 3371154 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.58 | 50.0 | 3.08e-01 | 97.6% | 37.4% |
| 4236566 | 304.8.1.65 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT, PF27446 | 0.58 | 44.0 | 3.95e-01 | 85.9% | 56.2% |
| 4549948 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 44.0 | 4.04e-01 | 85.9% | 60.8% |
| 5029251 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 49.0 | 4.95e-01 | 98.8% | 100.0% |
| 3223732 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.57 | 46.0 | 3.57e-01 | 91.8% | 39.5% |
| 3308135 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 42.0 | 4.23e-01 | 90.6% | 77.8% |
| 5017989 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.56 | 39.0 | 3.86e-01 | 72.9% | 67.8% |
| 3387224 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.56 | 43.0 | 3.86e-01 | 85.9% | 60.8% |
| 5036255 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.56 | 46.0 | 4.24e-01 | 92.9% | 70.4% |
| 3364258 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.56 | 43.0 | 4.29e-01 | 90.6% | 81.8% |
| 5013605 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.56 | 48.0 | 4.12e-01 | 100.0% | 84.8% |
| 3333863 | 304.8.1.47 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd | 0.56 | 40.0 | 3.70e-01 | 78.8% | 58.2% |
| 5023724 | 2.1.1.95 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Lig_C | 0.56 | 42.0 | 3.61e-01 | 80.0% | 85.9% |
| 4992138 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 39.0 | 3.85e-01 | 72.9% | 68.9% |
| 4017737 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.56 | 43.0 | 2.93e-01 | 84.7% | 44.4% |
| 4942718 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.55 | 42.0 | 4.05e-01 | 81.2% | 72.0% |
| 1954213 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.55 | 43.0 | 3.72e-01 | 88.2% | 60.0% |
| 4419286 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 44.0 | 4.33e-01 | 90.6% | 86.0% |
| 3672078 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.55 | 36.0 | 3.74e-01 | 74.1% | 74.7% |
| 4074419 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.55 | 37.0 | 3.70e-01 | 75.3% | 66.7% |
| 3467470 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.55 | 48.0 | 3.35e-01 | 100.0% | 36.2% |
| 3959682 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 37.0 | 3.94e-01 | 82.4% | 81.3% |
| 3319316 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 37.0 | 3.91e-01 | 71.8% | 82.7% |
| 5047234 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 37.0 | 3.65e-01 | 75.3% | 64.2% |
| 3804209 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.54 | 40.0 | 4.06e-01 | 94.1% | 81.2% |
| 3434168 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.54 | 42.0 | 4.02e-01 | 88.2% | 89.5% |
| 3815383 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 42.0 | 4.21e-01 | 90.6% | 87.1% |
| 5013279 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.54 | 41.0 | 4.28e-01 | 83.5% | 93.3% |
| 5007627 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.53 | 36.0 | 3.68e-01 | 74.1% | 73.8% |
| 3672469 | 304.55.1.18 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › ACT | 0.53 | 42.0 | 3.72e-01 | 90.6% | 75.7% |
| 3468691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 41.0 | 4.11e-01 | 85.9% | 84.3% |
| 5045407 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.53 | 42.0 | 3.72e-01 | 88.2% | 66.2% |
| 5024212 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.53 | 36.0 | 3.74e-01 | 75.3% | 76.2% |
| 3639208 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.53 | 37.0 | 2.55e-01 | 75.3% | 49.7% |
| 5050933 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.53 | 36.0 | 3.74e-01 | 75.3% | 76.2% |
| 3904850 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.53 | 36.0 | 3.54e-01 | 71.8% | 68.4% |
| 4266765 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.53 | 40.0 | 3.30e-01 | 90.6% | 42.4% |
| 3594490 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 42.0 | 3.09e-01 | 89.4% | 35.5% |
| 2595266 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.52 | 42.0 | 3.74e-01 | 91.8% | 62.2% |
| 5010510 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.52 | 35.0 | 3.64e-01 | 74.1% | 75.0% |
| 3678892 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.52 | 37.0 | 3.79e-01 | 81.2% | 78.8% |
| 3642698 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.52 | 33.0 | 3.80e-01 | 75.3% | 100.0% |
| 4948615 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.52 | 41.0 | 3.50e-01 | 90.6% | 94.7% |
| 5013284 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.51 | 41.0 | 4.36e-01 | 88.2% | 100.0% |
| 4963299 | 304.24.1.43 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PF25930 | 0.51 | 44.0 | 3.96e-01 | 100.0% | 80.0% |
| 4201251 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.50 | 37.0 | 2.69e-01 | 83.5% | 24.7% |