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IMGVR_UViG_3300000153_000016-3300000153-SI39nov09_135mDRAFT_100042930
Arc-VirIMGVR_UViG_3300000153_000016-3300000153-SI39nov09_135mDRAFT_100042930
Identity
- Kingdom:
- archaea
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-90
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k13X00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.56 | 40.0 | 3.83e-01 | 74.7% | 66.0% |
| 1vk1A02 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.56 | 39.0 | 3.48e-01 | 73.6% | 65.4% |
| 6oziB00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.55 | 38.0 | 2.90e-01 | 73.6% | 60.6% |
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.52 | 36.0 | 2.63e-01 | 70.1% | 44.9% |
| 3p1vA01 | 2.60.40.3250 | Mainly Beta › Sandwich › Immunoglobulin-like › Peptidase M64, N-terminal domain | 0.51 | 36.0 | 3.13e-01 | 73.6% | 57.2% |
| 3jtnB00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.54e-01 | 74.7% | 96.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964360 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.56 | 38.0 | 3.95e-01 | 75.9% | 76.2% |
| 3251388 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.50 | 35.0 | 3.31e-01 | 72.4% | 87.6% |