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IMGVR_UViG_3300000153_000029-3300000153-SI39nov09_135mDRAFT_10006114
Arc-VirIMGVR_UViG_3300000153_000029-3300000153-SI39nov09_135mDRAFT_10006114
Identity
- Kingdom:
- archaea
Quality
61.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-116
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g6eA00 | 2.60.20.30 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.65 | 49.0 | 4.70e-01 | 80.3% | 78.2% |
| 3muuB02 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.60 | 40.0 | 4.09e-01 | 78.9% | 71.2% |
| 1dm9A00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.54 | 48.0 | 4.31e-01 | 100.0% | 71.2% |
| 2k6pA00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.54 | 47.0 | 4.59e-01 | 100.0% | 88.1% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 2.97e-01 | 84.2% | 41.9% |
| 1vs5D02 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.50 | 45.0 | 4.20e-01 | 98.7% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2089783 | 1167.1.1.0 ↗ | 0.83 | 72.0 | 7.27e-01 | 96.1% | 92.1% | |
| 3281433 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.61 | 48.0 | 4.66e-01 | 100.0% | 75.3% |
| 3989121 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.58 | 51.0 | 4.82e-01 | 100.0% | 81.8% |
| 4018097 | 10.12.1.20 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_C | 0.55 | 42.0 | 3.35e-01 | 82.9% | 81.9% |
| 6217 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.54 | 48.0 | 4.31e-01 | 100.0% | 71.2% |
| 3825482 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.50 | 35.0 | 3.45e-01 | 73.7% | 95.3% |