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IMGVR_UViG_3300000154_000010-3300000154-SI47jul10_150mDRAFT_100008872
Arc-VirIMGVR_UViG_3300000154_000010-3300000154-SI47jul10_150mDRAFT_100008872
Identity
- Kingdom:
- archaea
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-115
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.72 | 53.0 | 4.26e-01 | 98.2% | 40.4% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 47.0 | 4.69e-01 | 89.0% | 76.1% |
| 3o8oB04 | 3.40.50.460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain | 0.63 | 42.0 | 3.81e-01 | 93.6% | 49.3% |
| 1ygpA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 47.0 | 3.36e-01 | 98.2% | 28.3% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.55 | 47.0 | 4.29e-01 | 95.4% | 73.5% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.55 | 46.0 | 4.23e-01 | 93.6% | 83.8% |
| 1yzyA02 | 3.40.980.20 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain | 0.54 | 46.0 | 4.01e-01 | 97.2% | 71.9% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.54 | 45.0 | 3.48e-01 | 93.6% | 42.4% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 46.0 | 4.52e-01 | 95.4% | 91.7% |
| 1ptmA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.53 | 42.0 | 2.99e-01 | 94.5% | 28.0% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 44.0 | 4.11e-01 | 95.4% | 93.5% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 43.0 | 3.93e-01 | 93.6% | 71.9% |
| 1aq0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 45.0 | 3.32e-01 | 100.0% | 58.2% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 44.0 | 4.02e-01 | 95.4% | 82.7% |
| 3hskA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 3.11e-01 | 84.4% | 45.8% |
| 1uocB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.39e-01 | 96.3% | 58.7% |
| 1vnsA01 | 1.20.144.10 | Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase | 0.51 | 45.0 | 3.88e-01 | 99.1% | 85.1% |
| 1e7uA05 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.51 | 41.0 | 3.47e-01 | 89.0% | 86.4% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 44.0 | 3.97e-01 | 94.5% | 81.0% |
| 6gszA04 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 44.0 | 3.15e-01 | 100.0% | 42.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781200 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 57.0 | 3.60e-01 | 100.0% | 24.2% |
| 4988250 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.61 | 50.0 | 3.62e-01 | 89.0% | 80.9% |
| 3803657 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.61 | 47.0 | 3.77e-01 | 100.0% | 41.4% |
| 3395845 | 109.4.1.514 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps54 | 0.60 | 52.0 | 3.29e-01 | 98.2% | 19.2% |
| 3580076 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.59 | 38.0 | 3.62e-01 | 83.5% | 54.6% |
| 3783943 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.58 | 42.0 | 4.54e-01 | 100.0% | 90.0% |
| 3735913 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.58 | 50.0 | 3.66e-01 | 96.3% | 60.6% |
| 5014971 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.57 | 42.0 | 3.47e-01 | 79.8% | 68.9% |
| 3665927 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.57 | 50.0 | 4.07e-01 | 99.1% | 55.7% |
| 3713159 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 43.0 | 4.15e-01 | 79.8% | 83.3% |
| 3491130 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 40.0 | 3.78e-01 | 75.2% | 91.9% |
| 3428868 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.55 | 47.0 | 3.64e-01 | 100.0% | 41.6% |
| 3998381 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.55 | 47.0 | 3.60e-01 | 100.0% | 41.2% |
| 3396240 | 2002.1.1.58 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_39 | 0.55 | 48.0 | 3.38e-01 | 100.0% | 42.7% |
| 4932823 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 44.0 | 3.80e-01 | 89.9% | 76.8% |
| 4963961 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.54 | 43.0 | 3.68e-01 | 89.0% | 96.3% |
| 3481133 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 47.0 | 3.90e-01 | 100.0% | 66.8% |
| 3613569 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 47.0 | 3.05e-01 | 99.1% | 50.1% |
| 4111537 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.53 | 46.0 | 4.10e-01 | 96.3% | 85.0% |
| 3837613 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.53 | 46.0 | 3.29e-01 | 96.3% | 52.2% |
| 3574770 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.53 | 45.0 | 4.12e-01 | 97.2% | 82.0% |
| 3780523 | 633.23.1.34 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 | 0.53 | 45.0 | 4.04e-01 | 96.3% | 85.6% |
| 3818627 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.53 | 47.0 | 3.31e-01 | 100.0% | 42.3% |
| 5034673 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.52 | 44.0 | 4.03e-01 | 93.6% | 81.3% |
| 3581259 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.52 | 39.0 | 4.28e-01 | 79.8% | 96.7% |
| 3860063 | 3567.1.1.99 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DC_STAMP, PF26039 | 0.52 | 45.0 | 3.72e-01 | 95.4% | 81.0% |
| 3789530 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.52 | 46.0 | 3.49e-01 | 100.0% | 50.2% |
| 3575380 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.52 | 46.0 | 4.02e-01 | 100.0% | 88.2% |
| 3186931 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.52 | 43.0 | 3.68e-01 | 93.6% | 88.9% |
| 3712308 | 109.1.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_6 | 0.52 | 43.0 | 3.33e-01 | 92.7% | 58.1% |
| 3942871 | 633.23.1.11 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PqiA | 0.52 | 46.0 | 4.09e-01 | 97.2% | 81.9% |
| 3532924 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.52 | 44.0 | 3.89e-01 | 96.3% | 79.4% |
| 3637501 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 45.0 | 3.98e-01 | 96.3% | 90.0% |
| 3265748 | 150.1.1.100 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › TMD0_ABC | 0.51 | 43.0 | 3.63e-01 | 91.7% | 82.1% |
| 4952898 | 3352.1.1.7 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF2142 | 0.51 | 44.0 | 2.91e-01 | 95.4% | 34.4% |
| 3896178 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.51 | 44.0 | 3.84e-01 | 95.4% | 94.5% |
| 3314029 | 633.23.1.32 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom | 0.51 | 45.0 | 3.94e-01 | 98.2% | 82.2% |
| 4223117 | 604.12.1.4 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 | 0.51 | 40.0 | 3.67e-01 | 81.7% | 69.3% |
| 3321310 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.50 | 41.0 | 4.05e-01 | 98.2% | 80.8% |
| 4189966 | 174.1.1.64 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › PF31049 | 0.50 | 45.0 | 4.01e-01 | 98.2% | 72.3% |
| 3287140 | 633.23.1.49 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PF31049 | 0.50 | 45.0 | 4.24e-01 | 99.1% | 86.2% |