←Back to structures
IMGVR_UViG_3300000154_000061-3300000154-SI47jul10_150mDRAFT_100251013
Arc-VirIMGVR_UViG_3300000154_000061-3300000154-SI47jul10_150mDRAFT_100251013
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-150
Domain cluster:
rep: NC_048639.1__YP_009830587.1__HWA94_gp16__00016__D331-429
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 77.9 | 6.50e-22 | 79.2% | 68.4% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.92 | 75.0 | 6.09e-01 | 84.2% | 54.8% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.89 | 74.0 | 6.15e-01 | 96.0% | 54.4% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.87 | 68.0 | 5.63e-01 | 80.2% | 52.8% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.84 | 63.0 | 5.33e-01 | 78.2% | 52.2% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 76.0 | 6.16e-01 | 97.0% | 55.5% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 74.0 | 5.92e-01 | 94.1% | 53.0% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 73.0 | 5.83e-01 | 96.0% | 56.6% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.79 | 68.0 | 5.72e-01 | 91.1% | 61.3% |
| 2dqaA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.78 | 58.0 | 5.40e-01 | 77.2% | 67.5% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 52.0 | 5.07e-01 | 81.2% | 70.4% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 56.0 | 5.11e-01 | 95.0% | 64.6% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.64 | 57.0 | 5.11e-01 | 98.0% | 77.3% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.62 | 42.0 | 4.13e-01 | 87.1% | 63.6% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 38.0 | 4.15e-01 | 82.2% | 81.0% |
| 4gewA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 31.0 | 3.49e-01 | 85.1% | 66.2% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.56 | 37.0 | 3.97e-01 | 84.2% | 77.0% |
| 2ogiB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 41.0 | 3.35e-01 | 78.2% | 82.4% |
| 8hixR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 41.0 | 3.07e-01 | 80.2% | 90.7% |
| 2a19A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.54 | 37.0 | 4.01e-01 | 78.2% | 84.7% |
| 4cbeA00 | 1.20.120.1640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 37.0 | 3.00e-01 | 87.1% | 34.9% |
| 2kwpA00 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.53 | 43.0 | 4.00e-01 | 87.1% | 96.1% |
| 8e9gE02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 38.0 | 3.78e-01 | 89.1% | 73.8% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.52 | 36.0 | 3.60e-01 | 77.2% | 69.3% |
| 1yhlA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 43.0 | 3.06e-01 | 96.0% | 63.3% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 35.0 | 3.02e-01 | 70.3% | 72.9% |
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.50 | 42.0 | 3.98e-01 | 94.1% | 79.7% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4431057 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.91 | 75.0 | 6.47e-01 | 85.1% | 69.0% |
| 3582448 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.90 | 73.0 | 6.55e-01 | 97.0% | 64.6% |
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.89 | 85.0 | 7.01e-01 | 100.0% | 61.6% |
| 3945171 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.89 | 78.0 | 6.77e-01 | 94.1% | 64.1% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.89 | 71.0 | 6.09e-01 | 83.2% | 60.0% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.89 | 73.0 | 5.71e-01 | 97.0% | 44.6% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.88 | 75.0 | 6.17e-01 | 94.1% | 53.9% |
| 4164050 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.88 | 73.0 | 5.57e-01 | 97.0% | 42.4% |
| 4321901 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.87 | 72.0 | 5.75e-01 | 97.0% | 47.0% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.87 | 74.0 | 5.96e-01 | 96.0% | 50.0% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.86 | 72.0 | 5.91e-01 | 95.0% | 51.8% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.86 | 76.0 | 6.17e-01 | 94.1% | 54.7% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 77.0 | 6.36e-01 | 95.0% | 59.4% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.85 | 77.0 | 6.21e-01 | 95.0% | 56.6% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 77.0 | 6.12e-01 | 95.0% | 55.0% |
| 5028353 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 77.0 | 6.16e-01 | 96.0% | 62.2% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 73.0 | 5.91e-01 | 97.0% | 52.6% |
| 3385979 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 72.0 | 5.72e-01 | 95.0% | 48.4% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.83 | 77.0 | 6.12e-01 | 97.0% | 54.1% |
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.83 | 74.0 | 5.85e-01 | 94.1% | 51.1% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.82 | 70.0 | 5.70e-01 | 95.0% | 52.9% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 73.0 | 5.76e-01 | 96.0% | 54.5% |
| 221869 | 235.1.1.16 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Peptidase_U40 | 0.80 | 68.0 | 5.66e-01 | 91.1% | 58.3% |
| 4455133 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 59.0 | 6.25e-01 | 92.1% | 87.5% |
| 4135695 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.79 | 53.0 | 5.91e-01 | 89.1% | 86.4% |
| 3289359 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 75.0 | 5.98e-01 | 100.0% | 57.8% |
| 3969917 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 74.0 | 5.72e-01 | 100.0% | 64.0% |
| 3970721 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.78 | 72.0 | 5.87e-01 | 99.0% | 61.7% |
| 3381140 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.77 | 72.0 | 5.85e-01 | 100.0% | 71.7% |
| 3205219 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.76 | 72.0 | 5.90e-01 | 100.0% | 65.9% |
| 3692876 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.76 | 71.0 | 5.76e-01 | 100.0% | 70.6% |
| 3691757 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 70.0 | 5.24e-01 | 100.0% | 53.5% |
| 3720940 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.75 | 70.0 | 5.71e-01 | 100.0% | 64.0% |
| 185214 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.72 | 50.0 | 5.31e-01 | 78.2% | 81.8% |
| 4990226 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.62 | 40.0 | 3.11e-01 | 88.1% | 29.1% |
| 4486411 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.57 | 38.0 | 2.86e-01 | 79.2% | 30.2% |
| 4136937 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.56 | 38.0 | 4.07e-01 | 77.2% | 82.4% |
| 4444483 | 189.1.1.7 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › Msb1-Mug8_dom | 0.54 | 38.0 | 2.84e-01 | 72.3% | 40.8% |
| 5056423 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.53 | 38.0 | 4.14e-01 | 79.2% | 88.2% |
| 4166913 | 1156.1.1.1 ↗ | alpha complex topology › EcoR124I HsdR C-terminal domain › EcoR124I HsdR C-terminal domain › EcoR124I HsdR C-terminal domain › EcoR124_C | 0.52 | 36.0 | 3.15e-01 | 71.3% | 51.0% |
| 3849657 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.51 | 30.0 | 3.07e-01 | 71.3% | 58.0% |
| 4615426 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.51 | 44.0 | 3.16e-01 | 100.0% | 52.2% |