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IMGVR_UViG_3300000154_000104-3300000154-SI47jul10_150mDRAFT_10052678
Arc-VirIMGVR_UViG_3300000154_000104-3300000154-SI47jul10_150mDRAFT_10052678
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 116-153
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g4fA00 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.77 | 67.0 | 5.12e-01 | 100.0% | 48.8% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.73 | 57.0 | 3.85e-01 | 100.0% | 21.8% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.71 | 58.0 | 4.01e-01 | 100.0% | 25.9% |
| 2xjpA02 | 6.20.60.20 | Special › Other non-globular › Rubrerythrin, domain 2 › | 0.62 | 42.0 | 4.29e-01 | 71.1% | 97.1% |
| 1qxmA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 47.0 | 3.36e-01 | 100.0% | 27.6% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.58 | 39.0 | 3.51e-01 | 71.1% | 87.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.12e-01 | 71.1% | 62.7% |
| 7zoiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 42.0 | 3.15e-01 | 100.0% | 32.0% |
| 5yh4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 40.0 | 2.80e-01 | 97.4% | 33.5% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 2.85e-01 | 94.7% | 54.7% |
| 3b43A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.21e-01 | 97.4% | 54.6% |
| 5ajqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 33.0 | 2.72e-01 | 97.4% | 29.1% |
| 2xliA01 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.51 | 38.0 | 2.70e-01 | 100.0% | 57.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256098 | 210.1.2.6 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B | 0.70 | 62.0 | 3.40e-01 | 100.0% | 9.8% |
| 3519410 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.69 | 45.0 | 4.48e-01 | 97.4% | 64.1% |
| 3929464 | 387.1.7.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold › Lustrin_cystein | 0.66 | 40.0 | 4.02e-01 | 97.4% | 57.5% |
| 3938927 | 387.1.7.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold › Lustrin_cystein | 0.64 | 39.0 | 3.95e-01 | 94.7% | 53.8% |
| 3697893 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.62 | 45.0 | 2.52e-01 | 84.2% | 33.3% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.61 | 41.0 | 3.15e-01 | 94.7% | 28.9% |
| 3702274 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.60 | 44.0 | 3.96e-01 | 84.2% | 71.7% |
| 4314610 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.57 | 45.0 | 2.83e-01 | 89.5% | 17.9% |
| 4986150 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 43.0 | 2.61e-01 | 92.1% | 35.8% |
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 40.0 | 3.45e-01 | 97.4% | 78.8% |
| 1948837 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.55 | 36.0 | 3.35e-01 | 86.8% | 45.8% |
| 3729585 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.54 | 42.0 | 2.74e-01 | 100.0% | 88.2% |
| 3088296 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 41.0 | 2.61e-01 | 89.5% | 16.7% |
| 3261599 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 42.0 | 2.65e-01 | 94.7% | 16.7% |
| 3923583 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.53 | 37.0 | 2.43e-01 | 84.2% | 40.0% |
| 2167777 | 330.10.1.1 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO | 0.52 | 43.0 | 3.37e-01 | 100.0% | 42.7% |
| 3461840 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.52 | 35.0 | 3.67e-01 | 97.4% | 80.0% |
| 4049705 | 387.1.1.30 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Cys_Knot_tox | 0.52 | 41.0 | 3.33e-01 | 89.5% | 45.3% |
| 3592929 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 35.0 | 2.20e-01 | 84.2% | 13.0% |
| 3255696 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 2.86e-01 | 100.0% | 57.8% |