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IMGVR_UViG_3300000154_000264-3300000154-SI47jul10_150mDRAFT_10051379
Arc-VirIMGVR_UViG_3300000154_000264-3300000154-SI47jul10_150mDRAFT_10051379
Identity
- Kingdom:
- archaea
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-41
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cf9A01 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.66 | 42.0 | 2.45e-01 | 73.2% | 6.7% |
| 3vusB00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.65 | 54.0 | 3.36e-01 | 100.0% | 19.1% |
| 3skvA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.64 | 50.0 | 3.29e-01 | 92.7% | 94.0% |
| 5unhA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 52.0 | 3.17e-01 | 100.0% | 42.2% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 3.87e-01 | 100.0% | 84.7% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 44.0 | 3.09e-01 | 100.0% | 28.8% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.53 | 40.0 | 3.02e-01 | 82.9% | 75.8% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.50 | 36.0 | 2.55e-01 | 80.5% | 55.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048633 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 67.0 | 4.42e-01 | 100.0% | 25.6% |
| 3718885 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 54.0 | 3.08e-01 | 78.0% | 9.1% |
| 3838562 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 46.0 | 4.17e-01 | 82.9% | 52.7% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 53.0 | 3.86e-01 | 100.0% | 30.8% |
| 3658440 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.60 | 44.0 | 4.04e-01 | 97.6% | 60.0% |
| 5027627 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 44.0 | 4.02e-01 | 80.5% | 89.1% |
| 2631980 | 3696.1.1.2 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD | 0.53 | 37.0 | 3.21e-01 | 80.5% | 63.6% |
| 5025035 | 3696.1.1.2 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD | 0.53 | 37.0 | 3.47e-01 | 82.9% | 88.3% |