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IMGVR_UViG_3300000164_000486-3300000164-SI39no09_200mDRAFT_10033261

Arc-Vir

IMGVR_UViG_3300000164_000486-3300000164-SI39no09_200mDRAFT_10033261

Quality

79.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-56
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ksnA01 1.20.225.20 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Ub domain-containing protein, DC-UbP/UBTD2, N-terminal domain 0.67 43.0 3.90e-01 73.2% 47.4%
1b89A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 53.0 3.30e-01 98.2% 36.4%
1bwoA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.52 37.0 3.21e-01 76.8% 95.6%
3wirA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 41.0 2.55e-01 98.2% 45.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4588018 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.88 73.0 6.05e-01 92.9% 52.6%
4053923 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.61 42.0 3.58e-01 75.0% 61.0%
4027610 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 52.0 4.11e-01 94.6% 71.3%
3910128 3736.1.1.1 alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 0.55 45.0 3.52e-01 96.4% 66.2%