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IMGVR_UViG_3300000167_000733-3300000167-SI39nov09_120mDRAFT_10056437

Arc-Vir

IMGVR_UViG_3300000167_000733-3300000167-SI39nov09_120mDRAFT_10056437

Quality

55.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-143
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a94A00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.82 56.0 6.61e-01 79.6% 100.0%
3slzA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.80 58.0 6.41e-01 83.8% 93.0%
3s8iA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.79 59.0 6.34e-01 81.7% 88.7%
4ehcA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.79 67.0 5.22e-01 88.7% 53.9%
7tbdB01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.79 63.0 5.97e-01 83.1% 100.0%
1b5fC00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.79 66.0 5.43e-01 87.3% 70.6%
1fmbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.78 56.0 6.40e-01 78.9% 100.0%
5n70A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.77 67.0 6.44e-01 91.5% 99.4%
5c9dB00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.77 61.0 6.65e-01 86.6% 98.3%
1mppA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.77 64.0 5.88e-01 88.0% 100.0%
1qs8A01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.77 65.0 5.99e-01 88.7% 98.3%
1t6eX02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.77 66.0 5.96e-01 90.8% 94.7%
1bxoA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 66.0 6.48e-01 91.5% 99.3%
1j71A01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 64.0 5.94e-01 88.7% 100.0%
1wkrA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 63.0 5.94e-01 88.0% 96.5%
3sqfA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 50.0 6.01e-01 74.6% 100.0%
1uh9A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 66.0 6.50e-01 91.5% 99.3%
1mppA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.76 66.0 6.08e-01 91.5% 95.4%
4pphA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.75 66.0 5.84e-01 92.3% 91.3%
1wkrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.75 64.0 5.99e-01 89.4% 94.7%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.75 57.0 6.36e-01 81.0% 100.0%
3vlaA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.75 65.0 5.57e-01 92.3% 92.6%
1smrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 65.0 6.34e-01 93.0% 99.4%
1j71A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 64.0 6.18e-01 92.3% 93.2%
3liyA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 56.0 6.17e-01 78.9% 98.3%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 64.0 6.27e-01 92.3% 99.4%
1miqA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.74 64.0 6.31e-01 92.3% 98.0%
1am5A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.73 64.0 6.29e-01 92.3% 100.0%
3aupD01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.73 60.0 5.49e-01 88.0% 96.8%
2jysA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.72 46.0 5.54e-01 83.8% 100.0%
1mvpA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.69 53.0 5.87e-01 81.0% 100.0%
2vijA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.68 52.0 5.37e-01 78.9% 100.0%
7tbdB02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.66 62.0 5.87e-01 100.0% 99.4%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.65 51.0 5.48e-01 81.7% 100.0%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 28.0 3.29e-01 74.6% 71.9%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 25.0 3.22e-01 85.9% 85.9%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1249817 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.83 57.0 6.72e-01 81.0% 100.0%
2793644 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.82 56.0 6.63e-01 79.6% 100.0%
3370298 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.81 61.0 6.84e-01 79.6% 100.0%
5031162 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.81 62.0 6.92e-01 79.6% 98.3%
3972732 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.81 65.0 6.81e-01 88.7% 92.2%
3334785 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.80 62.0 6.45e-01 81.7% 86.9%
4934668 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 63.0 6.55e-01 81.0% 100.0%
4933012 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 62.0 6.71e-01 80.3% 100.0%
3970790 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 66.0 7.00e-01 88.7% 98.4%
4969904 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.80 66.0 6.81e-01 87.3% 97.8%
4026285 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.80 67.0 4.92e-01 88.0% 52.2%
3938624 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.79 59.0 6.47e-01 81.7% 94.8%
3929659 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.79 62.0 6.35e-01 81.7% 90.4%
5029170 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 63.0 6.59e-01 83.8% 99.2%
3513100 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 60.0 6.53e-01 83.1% 95.0%
5032562 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 61.0 6.63e-01 81.7% 97.5%
4993154 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 63.0 6.63e-01 84.5% 100.0%
3923745 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 61.0 6.43e-01 81.0% 93.6%
3927612 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.78 61.0 6.71e-01 82.4% 100.0%
3933581 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.78 58.0 6.54e-01 78.2% 100.0%
5032107 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 60.0 6.31e-01 81.0% 100.0%
3922986 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 54.0 6.34e-01 78.2% 100.0%
4993656 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.78 62.0 6.65e-01 83.1% 100.0%
4494100 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 66.0 6.91e-01 90.1% 98.4%
5031038 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 61.0 6.47e-01 81.7% 100.0%
3421072 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.77 60.0 6.60e-01 81.7% 100.0%
4928555 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 64.0 6.81e-01 86.6% 100.0%
3511017 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.77 60.0 6.58e-01 82.4% 99.1%
5049040 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 54.0 6.07e-01 71.1% 92.6%
3496964 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 60.0 6.33e-01 82.4% 91.2%
3937611 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.77 58.0 6.50e-01 78.9% 100.0%
3249073 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.77 59.0 6.35e-01 81.0% 93.3%
3933744 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 55.0 6.18e-01 73.2% 95.5%
3510736 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.77 59.0 6.53e-01 83.8% 99.1%
4112343 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.77 59.0 6.23e-01 78.9% 90.4%
1088780 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.77 66.0 6.48e-01 90.1% 96.7%
3934130 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 61.0 6.39e-01 83.1% 93.8%
4968533 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.77 56.0 6.20e-01 75.4% 100.0%
3518811 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.77 58.0 6.45e-01 77.5% 100.0%
3923810 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 57.0 6.27e-01 76.8% 97.4%
3940308 1.1.1.27 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.77 72.0 5.15e-01 100.0% 97.6%
4968395 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 63.0 6.60e-01 86.6% 100.0%
4969351 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.76 57.0 6.25e-01 76.8% 100.0%
3235917 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.76 71.0 5.14e-01 100.0% 98.7%
3168921 304.48.1.105 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Peptidase_A2B 0.76 53.0 6.17e-01 76.8% 100.0%
1171414 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.76 64.0 5.89e-01 88.0% 97.2%
5073196 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.76 62.0 6.63e-01 85.2% 99.2%
3931849 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.76 60.0 6.33e-01 81.7% 93.6%
3724349 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.76 59.0 5.97e-01 80.3% 100.0%
3926561 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.76 57.0 6.17e-01 83.1% 91.7%
3994789 1.1.1.6 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease 0.76 62.0 6.27e-01 97.2% 86.4%
3932187 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 56.0 6.33e-01 76.8% 100.0%
3816743 1.1.1.20 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N 0.76 71.0 5.18e-01 100.0% 97.7%
3883471 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.76 58.0 6.04e-01 79.6% 93.8%
3684739 1.1.1.30 beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.75 59.0 6.40e-01 82.4% 99.2%
2 1.1.1.3 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.75 58.0 6.37e-01 81.0% 100.0%
4933942 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.75 57.0 6.25e-01 81.7% 97.4%
5023444 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.75 55.0 6.22e-01 76.1% 100.0%
4984547 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 58.0 6.35e-01 81.0% 100.0%
3934416 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.75 58.0 6.29e-01 81.0% 95.8%
3337491 1.1.2.29 beta barrels › cradle loop barrel › RIFT-related › double psi › RVP 0.75 53.0 6.17e-01 94.4% 100.0%
3366156 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.75 57.0 6.21e-01 79.6% 95.0%
4992338 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 54.0 6.11e-01 80.3% 100.0%
3941125 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 59.0 5.89e-01 82.4% 82.8%
3737912 1.1.1.13 beta barrels › cradle loop barrel › RIFT-related › acid protease › Peptidase_A2_2 0.75 52.0 6.02e-01 71.8% 100.0%
5031909 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 57.0 6.24e-01 82.4% 96.6%
1699081 1.1.1.9 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C 0.74 65.0 5.81e-01 92.3% 89.1%
2125379 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.74 64.0 6.27e-01 90.1% 98.7%
3939691 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.74 49.0 5.87e-01 71.8% 100.0%
2429554 1.1.1.27 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.74 69.0 5.14e-01 100.0% 98.2%
3518857 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.74 69.0 4.54e-01 100.0% 64.2%
3506070 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.74 58.0 5.57e-01 81.7% 96.2%
4933116 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.74 57.0 6.22e-01 81.7% 99.1%
4964766 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.74 55.0 6.17e-01 84.5% 100.0%
3509026 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.74 57.0 5.36e-01 81.0% 94.7%
5032212 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.73 57.0 5.86e-01 81.0% 96.2%
3225435 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.73 56.0 6.19e-01 88.0% 100.0%
3484754 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.73 53.0 5.95e-01 81.0% 97.3%
5030771 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.73 57.0 6.21e-01 81.7% 100.0%
3513377 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.73 52.0 5.98e-01 76.8% 100.0%
4984762 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.73 58.0 6.24e-01 94.4% 99.2%
5064814 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.72 68.0 6.12e-01 100.0% 97.9%
4932925 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.72 53.0 5.73e-01 76.1% 100.0%
3912599 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.72 54.0 5.90e-01 82.4% 92.5%
3516105 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.72 56.0 5.75e-01 81.0% 95.6%
5001647 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.72 50.0 5.66e-01 71.8% 100.0%
3933634 1.1.1.18 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.71 51.0 5.84e-01 78.9% 100.0%
4968321 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.71 51.0 5.86e-01 78.2% 100.0%
5032263 1.1.1.8 beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.71 60.0 6.30e-01 95.1% 98.5%
3805413 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.71 66.0 4.94e-01 100.0% 96.7%
3668951 1.1.1.17 beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.70 44.0 5.44e-01 70.4% 100.0%
2927644 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.69 61.0 5.79e-01 93.0% 97.5%
3514088 1.1.1.14 beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.69 58.0 5.94e-01 95.1% 94.0%
4969974 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.67 53.0 5.62e-01 87.3% 93.6%
4882945 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.65 53.0 5.54e-01 86.6% 96.2%
17 1.1.1.5 beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.64 52.0 5.56e-01 86.6% 99.2%
D2 medium residues 164-240
PDB