IMGVR_UViG_3300000172_000086-3300000172-SI34jun09_200mDRAFT_100220910

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000172_000086-3300000172-SI34jun09_200mDRAFT_100220910 ↗
Kingdom:: archaea

87.9 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-124

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6epkA02	3.30.67.10	Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2	0.62	24.0	3.15e-01	84.3%	60.6%
3dplC03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	34.0	4.00e-01	88.4%	78.3%
6c6sD02	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.58	25.0	3.40e-01	86.8%	78.3%
1uurA03	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.55	36.0	4.03e-01	95.9%	89.8%
2do7A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	34.0	3.95e-01	81.0%	95.0%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3272289	101.1.2.53 ↗	alpha arrays › HTH › HTH › winged helix domain › Mnd1	0.57	35.0	3.39e-01	81.0%	52.9%
3343522	3304.1.1.2 ↗	a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N	0.54	39.0	3.65e-01	94.2%	60.7%
3392763	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	35.0	3.98e-01	79.3%	92.9%
4543264	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.53	36.0	3.29e-01	83.5%	50.9%
5035389	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	32.0	3.67e-01	81.0%	87.1%
4961270	101.1.2.101 ↗	alpha arrays › HTH › HTH › winged helix domain › Cdc6_C	0.50	35.0	3.71e-01	77.7%	82.9%

D2 high residues 131-220_249-274

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2c41C01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.56	40.0	3.72e-01	73.3%	96.0%
1s35A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	38.0	4.09e-01	70.7%	100.0%
3fymA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.54	35.0	3.99e-01	97.4%	92.7%
6rnzA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.54	30.0	3.77e-01	100.0%	95.5%
2wauA02	1.20.58.830	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	39.0	3.89e-01	75.9%	99.2%
2ictA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.52	34.0	3.92e-01	85.3%	95.1%
4yg1A00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.51	29.0	3.56e-01	100.0%	90.3%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3279912	192.29.1.52 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy	0.57	44.0	4.00e-01	84.5%	83.4%
4560731	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.56	50.0	3.61e-01	99.1%	78.3%
3519143	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.55	48.0	3.61e-01	98.3%	74.8%
3836366	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.55	43.0	3.91e-01	86.2%	88.5%
3680048	604.6.1.2 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH	0.54	38.0	3.34e-01	72.4%	52.9%
4026202	192.15.1.0 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains	0.52	36.0	3.97e-01	93.1%	91.1%
5028018	5045.1.1.0 ↗	alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A	0.51	43.0	3.27e-01	94.0%	92.0%