←Back to structures

IMGVR_UViG_3300000179_000076-3300000179-LPjun09P16500mDRAFT_10012585

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000179_000076-3300000179-LPjun09P16500mDRAFT_10012585 ↗
Kingdom:: archaea

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 318-440

PDB

Domain cluster: rep: IMGVR_UViG_3300026087_000110-3300026087-Ga0208113_10042681__D732-837

D2 high residues 445-463_493-664

PDB

Domain cluster: rep: MN988519.1__QIG70811.1__EVB91_260__00240__D701-875_884-890

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2y7lA01	2.60.40.1280	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.52	33.0	3.59e-01	94.8%	75.2%
3esmA00	2.60.40.2230	Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775	0.51	32.0	3.70e-01	92.7%	86.2%

D3 high residues 1009-1084

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1hpgA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.67	46.0	4.23e-01	94.7%	54.5%
3kyfA02	2.40.10.220	Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains	0.61	46.0	4.02e-01	81.6%	84.6%
3ttgA00	3.30.1360.120	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1	0.59	50.0	3.34e-01	98.7%	72.7%
2qtlA02	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.58	43.0	3.91e-01	81.6%	69.2%
4rt0A00	2.40.10.220	Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains	0.57	44.0	3.93e-01	84.2%	82.6%
2i9yA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.53	36.0	2.88e-01	71.1%	86.0%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3972102	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.68	46.0	4.25e-01	71.1%	59.0%
3946545	1.1.8.21 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J	0.68	45.0	4.36e-01	100.0%	61.2%
3286458	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.68	47.0	4.01e-01	72.4%	69.6%
3805388	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.67	46.0	3.83e-01	71.1%	57.7%
3283246	1.1.16.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD	0.62	44.0	3.58e-01	100.0%	38.6%
4457938	1.1.7.9 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c	0.55	46.0	3.89e-01	90.8%	84.0%
3848539	58.1.1.1 ↗	beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1	0.54	40.0	3.56e-01	81.6%	67.0%
5040009	5.1.3.22 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH	0.53	36.0	2.40e-01	71.1%	48.4%
4328622	1.1.7.9 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c	0.52	43.0	3.70e-01	89.5%	86.1%
3762932	7.1.1.1 ↗	beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ	0.51	45.0	3.78e-01	100.0%	81.5%
4001508	7.1.1.1 ↗	beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ	0.50	45.0	3.68e-01	100.0%	81.4%
3447078	825.1.1.0 ↗	beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins	0.50	37.0	2.88e-01	81.6%	66.5%
3555043	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.50	26.0	2.68e-01	97.4%	48.0%

D4 medium residues 681-738

PDB

Domain cluster: rep: MN180248.1__QHJ75380.1__X__00018__D3-56