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IMGVR_UViG_3300000193_000010-3300000193-SI47jul10_135mDRAFT_100036826

Arc-Vir

IMGVR_UViG_3300000193_000010-3300000193-SI47jul10_135mDRAFT_100036826

Identity

Kingdom:
archaea

Quality

93.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-253
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 26.0 3.88e-01 99.2% 83.5%
2dibA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 24.0 3.66e-01 97.0% 86.6%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.60 26.0 3.69e-01 89.0% 83.2%
2h6oA02 2.60.40.2810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 32.0 3.93e-01 94.9% 81.9%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.57 23.0 3.22e-01 94.1% 73.0%
1p1eA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 23.0 3.26e-01 92.8% 78.2%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 25.0 3.73e-01 95.4% 100.0%
7zvmA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 20.0 2.97e-01 100.0% 74.5%
2r2cB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 23.0 3.24e-01 98.3% 81.7%
3cfuA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 30.0 3.68e-01 93.2% 86.8%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.52 25.0 2.91e-01 98.3% 61.3%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 27.0 3.57e-01 96.6% 94.3%
1ja1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 27.0 3.61e-01 96.6% 95.9%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385472 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 27.0 4.27e-01 99.6% 100.0%
4978554 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 28.0 4.09e-01 99.2% 98.0%
3415092 11.1.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida 0.61 30.0 3.49e-01 97.9% 64.7%
5003347 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.60 34.0 4.15e-01 97.9% 84.7%
3369936 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 26.0 3.71e-01 84.4% 85.7%
4492958 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 28.0 4.05e-01 97.9% 97.1%
3945286 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 27.0 3.86e-01 94.5% 92.4%
3219643 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.59 29.0 4.09e-01 99.6% 96.5%
5078687 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 34.0 4.14e-01 97.9% 88.0%
4223333 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 27.0 3.79e-01 94.9% 95.2%
5053390 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 24.0 3.45e-01 81.9% 83.8%
3699810 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 28.0 3.69e-01 97.0% 87.5%
4984467 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 24.0 3.52e-01 94.9% 93.7%
3890780 11.1.5.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.55 24.0 3.31e-01 88.6% 80.9%
3814044 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.54 32.0 3.93e-01 95.8% 91.9%
3937491 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 27.0 3.49e-01 89.0% 83.0%
3389050 11.1.1.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.53 28.0 3.56e-01 90.7% 84.3%
3884044 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.51 27.0 3.22e-01 88.6% 73.5%
5056905 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 22.0 3.33e-01 93.7% 100.0%
3232198 11.1.5.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.50 24.0 3.21e-01 88.6% 86.1%
D2 high residues 256-338
PDB
Domain cluster: rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00155__D177-242