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IMGVR_UViG_3300000193_000137-3300000193-SI47jul10_135mDRAFT_10034281

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300000193_000137-3300000193-SI47jul10_135mDRAFT_10034281 ↗
Kingdom:: archaea

Quality

80.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-36

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ijdA02	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.82	54.0	5.71e-01	88.6%	77.4%
1t3uA01	3.30.160.880	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain	0.62	43.0	4.21e-01	85.7%	65.1%
3hn0A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.61	48.0	3.19e-01	100.0%	58.2%
3qwuA02	3.30.470.30	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme	0.61	49.0	3.13e-01	91.4%	55.0%
2xqyA03	2.60.40.3190	Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain	0.60	48.0	3.38e-01	100.0%	34.6%
5y0uA02	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.59	44.0	4.46e-01	88.6%	82.4%
4ggmX02	3.40.140.80	Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain	0.59	45.0	3.20e-01	100.0%	52.0%
2a90A02	3.30.720.50	Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 ›	0.54	38.0	3.60e-01	100.0%	100.0%
3df7A02	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.53	44.0	2.98e-01	97.1%	77.4%
5zjgA02	1.10.246.130	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain	0.53	40.0	2.98e-01	94.3%	73.2%
1wu2A04	2.40.340.10	Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV	0.50	33.0	2.99e-01	100.0%	41.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4679597	304.128.1.0 ↗	a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB	0.71	56.0	4.29e-01	100.0%	95.8%
4869874	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.63	46.0	3.48e-01	91.4%	49.5%
5014020	1001.1.1.1 ↗	a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4	0.62	46.0	4.28e-01	82.9%	64.4%
3959171	4029.1.1.0 ↗	a+b duplicates or obligate multimers › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like	0.58	40.0	4.03e-01	88.6%	77.5%
4580548	109.4.1.211 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19,TPR_20	0.54	40.0	2.58e-01	88.6%	14.4%
3506095	167.1.1.1 ↗	alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7	0.53	42.0	2.87e-01	91.4%	22.1%
3726426	316.1.1.24 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm	0.53	36.0	2.39e-01	80.0%	51.4%
4031116	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.52	40.0	3.38e-01	85.7%	56.7%