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IMGVR_UViG_3300000198_000137-3300000198-LP_F_10_S103_200DRAFT_10038737
Arc-VirIMGVR_UViG_3300000198_000137-3300000198-LP_F_10_S103_200DRAFT_10038737
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 53-112
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s3rA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.74 | 52.0 | 5.53e-01 | 100.0% | 83.0% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 55.0 | 4.58e-01 | 98.3% | 47.6% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 52.0 | 4.54e-01 | 100.0% | 52.7% |
| 5swiD01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.66 | 36.0 | 2.36e-01 | 100.0% | 12.7% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 36.0 | 3.45e-01 | 91.7% | 44.6% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 36.0 | 3.17e-01 | 98.3% | 38.9% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.54e-01 | 96.7% | 42.3% |
| 3hvnA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.59 | 39.0 | 4.11e-01 | 96.7% | 81.1% |
| 2furB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 39.0 | 2.80e-01 | 73.3% | 42.6% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 42.0 | 3.53e-01 | 100.0% | 43.4% |
| 5hesA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 32.0 | 2.99e-01 | 98.3% | 39.5% |
| 2rckA01 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.56 | 48.0 | 3.32e-01 | 98.3% | 64.2% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 3.50e-01 | 98.3% | 45.9% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 3.37e-01 | 98.3% | 47.0% |
| 5w17A01 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.53 | 44.0 | 3.42e-01 | 98.3% | 50.7% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 42.0 | 3.20e-01 | 95.0% | 36.1% |
| 3hpeA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 40.0 | 3.04e-01 | 98.3% | 32.9% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 40.0 | 2.46e-01 | 91.7% | 88.0% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 41.0 | 2.65e-01 | 93.3% | 33.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950334 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.66 | 51.0 | 3.30e-01 | 85.0% | 68.6% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.65 | 46.0 | 3.86e-01 | 98.3% | 41.8% |
| 3713462 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.64 | 55.0 | 3.97e-01 | 100.0% | 60.5% |
| 5045394 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.62 | 47.0 | 3.48e-01 | 83.3% | 53.8% |
| 4930176 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.61 | 48.0 | 3.15e-01 | 88.3% | 70.3% |
| 4382345 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.59 | 45.0 | 3.49e-01 | 100.0% | 33.5% |
| 5062772 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 39.0 | 3.22e-01 | 100.0% | 40.0% |
| 3626053 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 49.0 | 3.90e-01 | 96.7% | 85.6% |
| 3246209 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.57 | 40.0 | 2.89e-01 | 91.7% | 25.0% |
| 4244412 | 11.1.1.929 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28202 | 0.56 | 39.0 | 2.87e-01 | 71.7% | 90.0% |
| 3964209 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.56 | 44.0 | 3.26e-01 | 100.0% | 31.8% |
| 4044404 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.56 | 42.0 | 3.63e-01 | 98.3% | 48.6% |
| 3634674 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.55 | 45.0 | 2.86e-01 | 98.3% | 57.8% |
| 3356242 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.55 | 47.0 | 4.05e-01 | 100.0% | 61.0% |
| 3386467 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.55 | 44.0 | 3.38e-01 | 91.7% | 52.0% |
| 5019455 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.55 | 45.0 | 3.27e-01 | 98.3% | 46.7% |
| 3788872 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.54 | 43.0 | 2.76e-01 | 98.3% | 40.7% |
| 2755622 | 243.1.1.5 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 | 0.54 | 46.0 | 3.07e-01 | 100.0% | 53.8% |
| 4377480 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.54 | 43.0 | 3.04e-01 | 100.0% | 29.8% |
| 3482747 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.54 | 46.0 | 3.71e-01 | 98.3% | 84.2% |
| 3484627 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.54 | 46.0 | 3.70e-01 | 98.3% | 84.2% |
| 4608078 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 42.0 | 2.70e-01 | 93.3% | 34.3% |
| 3453150 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.53 | 42.0 | 3.00e-01 | 91.7% | 27.2% |
| 3784766 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 40.0 | 2.43e-01 | 81.7% | 96.4% |
| 3261975 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.53 | 41.0 | 3.35e-01 | 96.7% | 43.1% |
| 3676182 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.52 | 42.0 | 2.65e-01 | 93.3% | 31.2% |
| 3254962 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.52 | 38.0 | 2.31e-01 | 78.3% | 72.7% |
| 2141638 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.51 | 40.0 | 2.96e-01 | 93.3% | 30.0% |
| 3481176 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 2.66e-01 | 100.0% | 23.0% |
| None | — | 0.51 | 43.0 | 2.77e-01 | 100.0% | 34.4% | |
| 3727278 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.50 | 41.0 | 2.95e-01 | 98.3% | 38.6% |
| 2845586 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.50 | 40.0 | 2.94e-01 | 88.3% | 57.6% |
| 5046300 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.50 | 35.0 | 3.25e-01 | 93.3% | 54.1% |