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IMGVR_UViG_3300000212_000118-3300000212-SI47jul10_120mDRAFT_10036118
Arc-VirIMGVR_UViG_3300000212_000118-3300000212-SI47jul10_120mDRAFT_10036118
Identity
- Kingdom:
- archaea
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-85
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.70 | 35.0 | 3.70e-01 | 82.4% | 52.0% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.70 | 44.0 | 3.63e-01 | 92.9% | 36.2% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.70 | 61.0 | 3.58e-01 | 100.0% | 12.8% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.65 | 46.0 | 3.31e-01 | 100.0% | 25.0% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 34.0 | 3.97e-01 | 89.4% | 71.7% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 30.0 | 2.33e-01 | 90.6% | 20.8% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 52.0 | 3.31e-01 | 98.8% | 19.7% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 53.0 | 3.17e-01 | 96.5% | 13.9% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.59 | 40.0 | 2.90e-01 | 96.5% | 24.4% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.59 | 36.0 | 3.19e-01 | 90.6% | 40.8% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 37.0 | 3.05e-01 | 94.1% | 33.1% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.57 | 39.0 | 3.19e-01 | 95.3% | 36.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 30.0 | 3.20e-01 | 77.6% | 57.9% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 32.0 | 2.88e-01 | 87.1% | 37.0% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 38.0 | 3.28e-01 | 97.6% | 45.6% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 2.82e-01 | 87.1% | 35.8% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 31.0 | 2.67e-01 | 88.2% | 34.8% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 26.0 | 2.36e-01 | 87.1% | 31.7% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 30.0 | 2.53e-01 | 88.2% | 32.4% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 35.0 | 3.05e-01 | 85.9% | 42.2% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.52 | 30.0 | 2.68e-01 | 88.2% | 36.6% |
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.25e-01 | 84.7% | 46.9% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 29.0 | 2.42e-01 | 91.8% | 28.9% |
| 1jpdX01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 28.0 | 2.70e-01 | 91.8% | 46.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3391818 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.74 | 48.0 | 4.58e-01 | 94.1% | 56.6% |
| 4880355 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.73 | 44.0 | 4.01e-01 | 88.2% | 45.9% |
| 1312416 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.72 | 44.0 | 3.92e-01 | 88.2% | 44.3% |
| 1169934 | 71.1.1.5 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF576 | 0.72 | 43.0 | 3.94e-01 | 94.1% | 45.1% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.71 | 34.0 | 2.80e-01 | 87.1% | 27.1% |
| 3797033 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.71 | 42.0 | 3.38e-01 | 92.9% | 32.3% |
| 3933957 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.69 | 47.0 | 3.85e-01 | 94.1% | 38.1% |
| 4878135 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.68 | 62.0 | 3.72e-01 | 100.0% | 17.0% |
| 4371295 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 60.0 | 3.65e-01 | 97.6% | 16.2% |
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.67 | 37.0 | 3.57e-01 | 90.6% | 47.4% |
| 4956937 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.66 | 40.0 | 2.66e-01 | 94.1% | 15.0% |
| 4677412 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.65 | 55.0 | 3.69e-01 | 98.8% | 24.3% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.64 | 40.0 | 3.39e-01 | 94.1% | 37.9% |
| 5063899 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 39.0 | 2.87e-01 | 91.8% | 23.2% |
| 3281686 | 331.3.1.27 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 | 0.61 | 34.0 | 2.75e-01 | 91.8% | 26.7% |
| 1734925 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.61 | 52.0 | 3.31e-01 | 98.8% | 19.7% |
| 3285689 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.60 | 40.0 | 3.82e-01 | 87.1% | 58.0% |
| 3966665 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.60 | 55.0 | 3.40e-01 | 98.8% | 20.0% |
| 4254174 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.59 | 35.0 | 2.90e-01 | 92.9% | 33.8% |
| 4931020 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.59 | 39.0 | 2.63e-01 | 94.1% | 16.3% |
| 4670128 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.58 | 51.0 | 3.71e-01 | 96.5% | 36.5% |
| 4113088 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.58 | 45.0 | 3.42e-01 | 83.5% | 56.2% |
| 3553322 | 5089.1.1.3 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin | 0.58 | 51.0 | 3.57e-01 | 94.1% | 44.5% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.58 | 47.0 | 3.42e-01 | 98.8% | 31.7% |
| 3968681 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.58 | 51.0 | 3.22e-01 | 98.8% | 19.4% |
| 3788958 | 825.1.1.0 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins | 0.56 | 44.0 | 3.53e-01 | 89.4% | 69.6% |
| 1502527 | 5089.1.1.4 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF_1 | 0.56 | 49.0 | 3.32e-01 | 95.3% | 53.7% |
| 4985492 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.56 | 38.0 | 2.69e-01 | 92.9% | 21.9% |
| 3402087 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.55 | 29.0 | 2.37e-01 | 88.2% | 24.7% |
| 4947601 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.54 | 35.0 | 2.49e-01 | 92.9% | 18.7% |
| 4018089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 32.0 | 2.91e-01 | 84.7% | 42.5% |
| 4175473 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.53 | 45.0 | 3.10e-01 | 95.3% | 25.3% |
| 3442957 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.70e-01 | 90.6% | 66.4% |
| 4088107 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.53 | 40.0 | 3.69e-01 | 94.1% | 62.7% |
| 3671408 | 11.1.1.80 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_beta | 0.52 | 43.0 | 3.57e-01 | 92.9% | 58.7% |
| 4945417 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.86e-01 | 95.3% | 73.3% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.52 | 37.0 | 3.23e-01 | 84.7% | 47.1% |
| 3832952 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.51 | 36.0 | 3.00e-01 | 89.4% | 39.4% |
| 4946917 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 44.0 | 3.93e-01 | 94.1% | 81.7% |
| 4556738 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.51 | 43.0 | 3.22e-01 | 98.8% | 67.2% |
| 6334 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.50 | 32.0 | 2.68e-01 | 84.7% | 35.4% |
D2
medium
residues 86-201
Domain cluster:
rep: CAKLQC020000002.1__CAH1070048.1__SAMEA5780033_00257__00001__D178-191_224-324
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.83 | 59.0 | 3.87e-01 | 100.0% | 20.0% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.74 | 65.0 | 4.12e-01 | 100.0% | 20.2% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.70 | 60.0 | 3.71e-01 | 100.0% | 16.9% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.69 | 64.0 | 3.98e-01 | 100.0% | 19.6% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.66 | 59.0 | 3.77e-01 | 100.0% | 21.2% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 60.0 | 3.85e-01 | 100.0% | 24.5% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 59.0 | 3.72e-01 | 100.0% | 20.0% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.62 | 47.0 | 3.37e-01 | 97.4% | 26.2% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.62 | 42.0 | 3.87e-01 | 100.0% | 52.3% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.61 | 55.0 | 3.73e-01 | 100.0% | 28.4% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.61 | 56.0 | 3.55e-01 | 100.0% | 21.8% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.60 | 36.0 | 3.46e-01 | 100.0% | 52.7% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.57 | 35.0 | 4.12e-01 | 93.1% | 92.2% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.53 | 34.0 | 4.02e-01 | 97.4% | 92.6% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 38.0 | 3.90e-01 | 96.6% | 78.0% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 34.0 | 3.05e-01 | 94.8% | 46.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839821 | 5084.5.1.51 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TonB_dep_Rec_b-barrel | 0.74 | 68.0 | 4.37e-01 | 98.3% | 25.2% |
| 1883909 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.69 | 65.0 | 3.93e-01 | 100.0% | 18.0% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.67 | 49.0 | 4.23e-01 | 100.0% | 49.7% |
| 3839269 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.64 | 59.0 | 3.66e-01 | 100.0% | 22.1% |
| 3838163 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.64 | 58.0 | 3.70e-01 | 100.0% | 22.4% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.62 | 49.0 | 3.83e-01 | 100.0% | 40.4% |
| 4224449 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.54 | 36.0 | 3.19e-01 | 99.1% | 45.4% |
| 139979 | 5084.2.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › Omptin | 0.53 | 48.0 | 3.60e-01 | 99.1% | 41.9% |
| 3446652 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.51 | 40.0 | 3.45e-01 | 99.1% | 52.4% |
| 3672099 | 222.1.1.2 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE | 0.51 | 40.0 | 3.46e-01 | 86.2% | 56.9% |