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IMGVR_UViG_3300000342_000012-3300000342-OneHSP_7476CDRAFT_10005544
Arc-VirIMGVR_UViG_3300000342_000012-3300000342-OneHSP_7476CDRAFT_10005544
Identity
- Kingdom:
- archaea
Quality
64.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 293-454
Domain cluster:
rep: IMGVR_UViG_3300026906_000148-3300026906-Ga0208683_1017652__D284-445
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00092.35 best | VWA | 32.5 | 1.30e-07 | 93.8% | 86.8% |
| PF05762.21 | VWA_CoxE | 29.9 | 5.00e-07 | 76.5% | 51.3% |
| PF13519.13 | VWA_2 | 27.4 | 5.90e-06 | 60.5% | 98.2% |
D2
medium
residues 13-168
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 37.0 | 3.76e-01 | 73.7% | 96.0% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 37.0 | 3.59e-01 | 74.4% | 73.1% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 27.0 | 2.98e-01 | 84.0% | 61.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3185557 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.57 | 42.0 | 3.87e-01 | 75.6% | 92.0% |
| 4151484 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.52 | 39.0 | 3.61e-01 | 76.9% | 95.5% |
| 3838241 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 40.0 | 3.72e-01 | 84.0% | 98.5% |
| 3989173 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.50 | 38.0 | 3.41e-01 | 78.2% | 87.6% |