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IMGVR_UViG_3300000342_000019-3300000342-OneHSP_7476CDRAFT_100012922
Arc-VirIMGVR_UViG_3300000342_000019-3300000342-OneHSP_7476CDRAFT_100012922
Identity
- Kingdom:
- archaea
Quality
69.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-127
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.58 | 38.0 | 3.76e-01 | 74.4% | 60.9% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.55 | 34.0 | 3.86e-01 | 85.6% | 84.1% |
| 4mt1A03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.55 | 40.0 | 4.39e-01 | 84.8% | 96.9% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 4.07e-01 | 96.8% | 90.5% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 4.20e-01 | 81.6% | 100.0% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 38.0 | 3.72e-01 | 80.0% | 66.9% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.87e-01 | 82.4% | 82.5% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.53 | 36.0 | 4.10e-01 | 82.4% | 94.4% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 38.0 | 4.15e-01 | 75.2% | 96.1% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 44.0 | 4.21e-01 | 92.8% | 100.0% |
| 1j6wA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.52 | 42.0 | 3.93e-01 | 89.6% | 97.5% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.52 | 42.0 | 3.79e-01 | 88.0% | 86.4% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 41.0 | 3.59e-01 | 85.6% | 68.9% |
| 1zysA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 4.01e-01 | 94.4% | 93.7% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.51 | 34.0 | 3.82e-01 | 85.6% | 89.6% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.51 | 30.0 | 3.41e-01 | 84.8% | 81.2% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.51 | 39.0 | 4.08e-01 | 84.0% | 91.5% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.50 | 35.0 | 3.83e-01 | 86.4% | 89.2% |
| 6ruiK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.50 | 35.0 | 3.73e-01 | 70.4% | 86.4% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.50 | 37.0 | 3.89e-01 | 84.8% | 84.8% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.50 | 37.0 | 3.72e-01 | 79.2% | 86.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4469636 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.61 | 39.0 | 4.57e-01 | 82.4% | 94.1% |
| 3702916 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.59 | 44.0 | 4.20e-01 | 78.4% | 96.7% |
| 4627501 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.58 | 40.0 | 4.51e-01 | 72.0% | 98.9% |
| 4273759 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.57 | 37.0 | 4.07e-01 | 76.8% | 81.8% |
| 3445077 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 38.0 | 4.43e-01 | 72.0% | 100.0% |
| 3665392 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 41.0 | 4.19e-01 | 75.2% | 99.2% |
| 3513861 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.56 | 35.0 | 4.12e-01 | 86.4% | 96.2% |
| 3278894 | 304.8.1.61 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT1 | 0.56 | 42.0 | 4.47e-01 | 78.4% | 97.1% |
| 3227174 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 38.0 | 4.28e-01 | 84.0% | 96.7% |
| 5027652 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 36.0 | 4.05e-01 | 88.0% | 86.3% |
| 4632598 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 41.0 | 4.25e-01 | 80.0% | 88.3% |
| 4212314 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.55 | 34.0 | 3.75e-01 | 80.0% | 77.0% |
| 4540833 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.55 | 35.0 | 4.15e-01 | 84.0% | 95.3% |
| 4390550 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 39.0 | 4.17e-01 | 73.6% | 90.5% |
| 5038341 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.55 | 39.0 | 4.19e-01 | 97.6% | 88.6% |
| 3616172 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.54 | 34.0 | 3.92e-01 | 84.8% | 95.0% |
| 5045726 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.54 | 33.0 | 4.03e-01 | 78.4% | 95.0% |
| 4064719 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.54 | 36.0 | 3.89e-01 | 79.2% | 81.0% |
| 4980649 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.54 | 37.0 | 3.93e-01 | 88.0% | 82.4% |
| 4930471 | 304.4.1.79 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MCR_D | 0.54 | 35.0 | 3.86e-01 | 84.0% | 83.0% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 38.0 | 3.92e-01 | 82.4% | 78.3% |
| 4984314 | 304.43.1.6 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › FLAD1_M | 0.53 | 35.0 | 4.05e-01 | 84.0% | 93.3% |
| 5053080 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.53 | 34.0 | 3.97e-01 | 82.4% | 95.2% |
| 4937238 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.53 | 36.0 | 3.88e-01 | 88.0% | 82.9% |
| 5052894 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.53 | 36.0 | 4.02e-01 | 83.2% | 92.5% |
| 4020643 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.53 | 34.0 | 3.86e-01 | 87.2% | 87.4% |
| 3340180 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.52 | 37.0 | 4.05e-01 | 97.6% | 92.0% |
| 5049353 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 39.0 | 3.91e-01 | 92.0% | 77.6% |
| 4994641 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.52 | 36.0 | 4.05e-01 | 84.0% | 93.7% |
| 4983053 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.52 | 34.0 | 3.96e-01 | 81.6% | 97.6% |
| 4963469 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 35.0 | 3.81e-01 | 82.4% | 83.8% |
| 3605282 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 45.0 | 4.01e-01 | 96.0% | 100.0% |
| 138988 | 304.134.1.1 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › Saccharop_dh_N | 0.51 | 34.0 | 3.81e-01 | 85.6% | 88.7% |
| 3361442 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 45.0 | 3.25e-01 | 99.2% | 64.3% |
| 4941329 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.51 | 33.0 | 3.62e-01 | 78.4% | 82.0% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.51 | 39.0 | 4.10e-01 | 84.0% | 93.1% |
| 4983137 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.50 | 35.0 | 3.44e-01 | 70.4% | 100.0% |
| 3471847 | 304.28.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SGT1 | 0.50 | 43.0 | 3.93e-01 | 97.6% | 77.7% |